G220680


Basic Information

Item Value
gene id G220680
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7807308 ~ 7807663 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU251813
gaaacacagaccttatctgaagtagatcaagacattctctatggaagacatgaacagaggcggtttaaacctgaaacacagaccttatctgaagtagatcaagacattctctatggaagacatgaccAGAGGTGGTTTAAGTCtgtacgaaacacagaccttatctgaagtagatcaagacattctctatggaagacatgaacagaggcgGTTTAAGTCtgtacgaaacacagaccttatctgaagtagatcaagacattctctatggaagacatgaccAGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251813 True 284 lncRNA 0.41 2 7807308 7807663

Neighbor

gene id symbol gene type direction distance location
LOC110508507 LOC106575080 coding upstream 179341 7618368 ~ 7627967 (+)
LOC110508431 LOC106575520 coding upstream 306771 7460440 ~ 7500537 (+)
LOC118945274 LOC106575512 coding upstream 359426 7437011 ~ 7447882 (+)
LOC110536044 LOC106575458 coding upstream 449900 7348131 ~ 7357408 (+)
LOC110508415 LOC106605928 coding upstream 636865 7161950 ~ 7170443 (+)
LOC110513974 efna3 coding downstream 133639 7941302 ~ 8086452 (+)
efna1b LOC106574320 coding downstream 340744 8148407 ~ 8159396 (+)
LOC110520790 LOC106606111 coding downstream 362971 8170634 ~ 8178058 (+)
LOC110520877 LOC106574226 coding downstream 437565 8245228 ~ 8249653 (+)
krtcap2 kcp2 coding downstream 442090 8249753 ~ 8254163 (+)
G220679 NA non-coding upstream 165 7806721 ~ 7807143 (+)
G220668 NA non-coding upstream 21834 7784512 ~ 7785474 (+)
G220645 NA non-coding upstream 49594 7748346 ~ 7757714 (+)
G220646 NA non-coding upstream 54713 7751502 ~ 7752595 (+)
G220600 NA non-coding upstream 60483 7663177 ~ 7746825 (+)
G221077 NA non-coding downstream 42975 7850638 ~ 7850852 (+)
G221141 NA non-coding downstream 123334 7930997 ~ 7934358 (+)
G221153 NA non-coding downstream 279004 8086667 ~ 8087262 (+)
G221242 NA non-coding downstream 311966 8119629 ~ 8120076 (+)
G221262 NA non-coding downstream 355631 8163294 ~ 8164016 (+)
G220445 LOC106575489 other upstream 425745 7378258 ~ 7381563 (+)
G220435 NA other upstream 442023 7359668 ~ 7365285 (+)
LOC110508323 LOC106575347 other upstream 820786 6979131 ~ 6988449 (+)
G221299 s10i other downstream 591408 8399071 ~ 8489067 (+)
G221514 NA other downstream 921314 8728977 ~ 8732478 (+)
LOC110520796 fam189b other downstream 953671 8715996 ~ 8766590 (+)
LOC110520836 LOC106605888 other downstream 966384 8772336 ~ 8800464 (+)

Expression


Co-expression Network