G221077


Basic Information

Item Value
gene id G221077
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 7850638 ~ 7850852 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU252277
agggaaaataaataagcataaatatgggttgtatttacaatggtgtttgttcttcactggttgcccttttctcgtggcaacaggtcacaaatcttgctgctgtgatggcacactgtggaatttcacccagtagatatgggagtttatcaaaattggatttgttttcgaattctttgtggatctgtgtaatctgagggaaatatgtctctctaata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU252277 True 215 lncRNA 0.38 1 7850638 7850852

Neighbor

gene id symbol gene type direction distance location
LOC110508507 LOC106575080 coding upstream 222671 7618368 ~ 7627967 (+)
LOC110508431 LOC106575520 coding upstream 350101 7460440 ~ 7500537 (+)
LOC118945274 LOC106575512 coding upstream 402756 7437011 ~ 7447882 (+)
LOC110536044 LOC106575458 coding upstream 493230 7348131 ~ 7357408 (+)
LOC110508415 LOC106605928 coding upstream 680195 7161950 ~ 7170443 (+)
LOC110513974 efna3 coding downstream 90450 7941302 ~ 8086452 (+)
efna1b LOC106574320 coding downstream 297555 8148407 ~ 8159396 (+)
LOC110520790 LOC106606111 coding downstream 319782 8170634 ~ 8178058 (+)
LOC110520877 LOC106574226 coding downstream 394376 8245228 ~ 8249653 (+)
krtcap2 kcp2 coding downstream 398901 8249753 ~ 8254163 (+)
G220680 NA non-coding upstream 42975 7807308 ~ 7807663 (+)
G220679 NA non-coding upstream 43495 7806721 ~ 7807143 (+)
G220668 NA non-coding upstream 65164 7784512 ~ 7785474 (+)
G220645 NA non-coding upstream 92924 7748346 ~ 7757714 (+)
G220646 NA non-coding upstream 98043 7751502 ~ 7752595 (+)
G221141 NA non-coding downstream 80145 7930997 ~ 7934358 (+)
G221153 NA non-coding downstream 235815 8086667 ~ 8087262 (+)
G221242 NA non-coding downstream 268777 8119629 ~ 8120076 (+)
G221262 NA non-coding downstream 312442 8163294 ~ 8164016 (+)
G220445 LOC106575489 other upstream 469075 7378258 ~ 7381563 (+)
G220435 NA other upstream 485353 7359668 ~ 7365285 (+)
LOC110508323 LOC106575347 other upstream 864116 6979131 ~ 6988449 (+)
G221299 s10i other downstream 548219 8399071 ~ 8489067 (+)
G221514 NA other downstream 878125 8728977 ~ 8732478 (+)
LOC110520796 fam189b other downstream 910482 8715996 ~ 8766590 (+)
LOC110520836 LOC106605888 other downstream 923195 8772336 ~ 8800464 (+)

Expression


Co-expression Network