G221702


Basic Information

Item Value
gene id G221702
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 8166259 ~ 8166792 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253056
agtgaccatcaactcacactAATGACCGTCAAcccacactagtgaccatcaactcacactagtgaccatcaactcatactagtgaccatcaactcacactAGTGGCCATCAActcacactagtgaccatcaactcacactagtgaccatcaacccacactagtgaccatcaactcacactagtgaccatcaacccacactagtgaccatcaactcacactagtgaccatcaactcacactagtgaccatcaacccacactagtgaccatcaactcacactagtgaccatcaacccacactagtgaccatcaacccacactagtgaccattaactcacactagtgaccatcaactcacactagtgaccatcaacccacaCTAGTGACCATTAACTCACACTATTGACCATCAAcccacactagtgaccatcaactcacactagtgaccatcaacccacactagtgaccatcaacccacactagtgaccatcaactcacactAGTGACCAGCAACCCACACTAGTGACCTTCAAcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253056 True 534 lncRNA 0.47 1 8166259 8166792

Neighbor

gene id symbol gene type direction distance location
si:dkey-246i14.3 LOC106570832 coding downstream 325784 7744358 ~ 7840475 (-)
LOC110520788 LOC106593005 coding downstream 549066 7577008 ~ 7617193 (-)
LOC110508498 NA coding downstream 590645 7573853 ~ 7575614 (-)
LOC110508494 LOC106575071 coding downstream 592740 7554786 ~ 7573519 (-)
LOC110508481 LOC106573839 coding downstream 614232 7531548 ~ 7552027 (-)
LOC110520794 LOC105024462 coding upstream 47800 8214332 ~ 8243743 (-)
LOC110520844 LOC106605887 coding upstream 300144 8466936 ~ 8495390 (-)
LOC110520892 LOC106605923 coding upstream 532243 8699031 ~ 8703263 (-)
LOC118964373 NA coding upstream 534671 8701463 ~ 8701598 (-)
LOC118964372 NA coding upstream 535091 8701883 ~ 8702017 (-)
G221701 NA non-coding downstream 1486 8164457 ~ 8164773 (-)
G221667 NA non-coding downstream 49558 8115184 ~ 8116701 (-)
G221642 NA non-coding downstream 79006 8086667 ~ 8087253 (-)
G221148 NA non-coding downstream 228432 7937543 ~ 7937827 (-)
G221132 NA non-coding downstream 256106 7909554 ~ 7910153 (-)
G221707 NA non-coding upstream 8607 8175399 ~ 8183561 (-)
G221708 NA non-coding upstream 11931 8178723 ~ 8184216 (-)
G221696 NA non-coding upstream 44849 8211641 ~ 8214242 (-)
G221719 NA non-coding upstream 58208 8225000 ~ 8225310 (-)
LOC110508472 LOC106573847 other downstream 635942 7528026 ~ 7530317 (-)
LOC110508454 s10ag other downstream 641767 7517195 ~ 7524544 (-)
LOC110520792 LOC106575505 other downstream 730088 7408252 ~ 7436195 (-)
G220751 NA other downstream 964838 7176392 ~ 7201421 (-)
G221788 LOC106574877 other upstream 182527 8345683 ~ 8350289 (-)
G221806 NA other upstream 227569 8394361 ~ 8410809 (-)
G221807 adar other upstream 336392 8503184 ~ 8523208 (-)
G221986 NA other upstream 596327 8763119 ~ 8763884 (-)
LOC110520835 ash1l other upstream 637905 8804651 ~ 8839679 (-)

Expression


Co-expression Network