G221708



Basic Information


Item Value
gene id G221708
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 8178723 ~ 8184216 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU253066
tgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagacatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccaccttggAGACActccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgattttcttcagcagggacagggaagatggttaaaatt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU253066 True 377 lncRNA 0.43 2 8178723 8184216

Neighbor


gene id symbol gene type direction distance location
si:dkey-246i14.3 LOC106570832 coding downstream 338248 7744358 ~ 7840475 (-)
LOC110520788 LOC106593005 coding downstream 561530 7577008 ~ 7617193 (-)
LOC110508498 NA coding downstream 603109 7573853 ~ 7575614 (-)
LOC110508494 LOC106575071 coding downstream 605204 7554786 ~ 7573519 (-)
LOC110508481 LOC106573839 coding downstream 626696 7531548 ~ 7552027 (-)
LOC110520794 LOC105024462 coding upstream 30376 8214332 ~ 8243743 (-)
LOC110520844 LOC106605887 coding upstream 282720 8466936 ~ 8495390 (-)
LOC110520892 LOC106605923 coding upstream 514819 8699031 ~ 8703263 (-)
LOC118964373 NA coding upstream 517247 8701463 ~ 8701598 (-)
LOC118964372 NA coding upstream 517667 8701883 ~ 8702017 (-)
G221702 NA non-coding downstream 11931 8166259 ~ 8166792 (-)
G221701 NA non-coding downstream 13950 8164457 ~ 8164773 (-)
G221667 NA non-coding downstream 62022 8115184 ~ 8116701 (-)
G221642 NA non-coding downstream 91470 8086667 ~ 8087253 (-)
G221148 NA non-coding downstream 240896 7937543 ~ 7937827 (-)
G221696 NA non-coding upstream 27425 8211641 ~ 8214242 (-)
G221719 NA non-coding upstream 40784 8225000 ~ 8225310 (-)
G221720 NA non-coding upstream 69018 8253234 ~ 8254152 (-)
G221734 NA non-coding upstream 77934 8262150 ~ 8262373 (-)
LOC110508472 LOC106573847 other downstream 648406 7528026 ~ 7530317 (-)
LOC110508454 s10ag other downstream 654231 7517195 ~ 7524544 (-)
LOC110520792 LOC106575505 other downstream 742552 7408252 ~ 7436195 (-)
G220751 NA other downstream 977302 7176392 ~ 7201421 (-)
G221788 LOC106574877 other upstream 165103 8345683 ~ 8350289 (-)
G221806 NA other upstream 210145 8394361 ~ 8410809 (-)
G221807 adar other upstream 318968 8503184 ~ 8523208 (-)
G221986 NA other upstream 578903 8763119 ~ 8763884 (-)
LOC110520835 ash1l other upstream 620481 8804651 ~ 8839679 (-)

Expression



Co-expression Network