G221696


Basic Information

Item Value
gene id G221696
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 8211641 ~ 8214242 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253049
cacatttggaatcatgtagtaaccaaagtgtaaccaaagtgttaaacaaatatatttgtggaggccaggtcatctgatgcagcagtccatcagtcttgatcaaatagccctttcacagtctggaggtgtgttgagttattgtcctgttaaaaaacaaatgatagtcccactaaaccagatggggtggtgtatcgctgcagaatgctgtggtagccatgctggttaagtgtgccttgaattctaaataaatcacagacagtgtcaccagcaaagcacacccacaccatcactcctcctcttccatgcttcacggtgggaccaacacatgcagagatcatccgtttatCAAcactgcttctcacaaagacactgcagttggaaccaaaaatctcaaattttgactcatcagaccaaaggacagatttccaccagtctaatgtccattgctcgtgtttcttggcccaagcaagtctcttcttattattggtgtcctttagtagtggtttctttgcagaatttcaaccatgaaggcctgattcacgcagtctcctctgaacagctgatgttgagatgtgtctgttacttgaactctgcgaagcgtttatttgggctgcagtctgatgtgcagttaactctaatgaacttgtcctctgcagcagaagtacgtctgtgtcttcctttcctgtggctgtcctcatgagagccatgtTGTAAAGTcttgatggactgtcgtttccctttgcttatttgagctgttcttgccataatatggacttggtcttttaccaaataggactatcttctgtataccacccctaccttgtcacaacacaactgattggctcaaatgcattaagaaggaaataaattccacaaattaacttttaacaaggcacacctgttaaaacCTCTTTGTGCTAGATGTggcgctagcgacccacctcgacaacaggaGTGCGAAATTCAAATTATAGAAATAGTAATATtcaacattcatgaaaatacaagtgtcatacatcagaAAAAAgttgaacttcttgttaatccagctgctctgtcagatttcaaaaaggctttacggcgaaagcacaccatgcgattatctgaggacagcgccccgcacacaaaataatttaaaacattttccaaccaggcaggtgcgcgacaaaagtcagaaatagcgataaaataaatgccttacctttgaagatcttcttctgttggcactccaaaaggtcccagctacatcacaaatggtccttttgtttgataaagtccttctttatatctccaaaaactcagtttagctggcatgcttcattcaataatccactagtttccctccttcaaaatgcatacaaaatgaatcccaaacattaccaataaacttctccaaacaagtcaaacaacgtttataatcaaacctcaggtaccctaatacataaataaacgataaaatttaagaccgagaatcgttattgtctttaccggagataaacaacaaaGTACGTGCTCTCATCCACGCTCATTAAAACACTACAGcgaaaatgggagccacttagaaaagctacaaattctagctcatttttccaaaaacaagcctgaaactctttgtaaagactgttgacatctagtggaagctctAGGAACTGCAATCTTGGATGTTTTCTCTTCATATTAAACATGACAGCCATTGGAATCAGTGGTGGGCTGAATTCTTTTTTtttctggatggtttgtcctcaggttttcgcctgtcatatcagttctattatactcacagacattattttaacagttttataaATTTTAGAGTGTTGTCTATACAAATCTATCCAATTATTTGCATATCcaagcttctgggcctgagtaacaggcagtttactttgggcacgcttttcatccaggtgtcaaaatactgccccctagcccaaagaggttaattgaaatgcattccaggtgactacctcatgatgctggttgagagaatgccaacagtgtgcaaagctgccatcaaggcaaagggtggctactttttagaatataaaatatattttgatttctttaacactttttgggttactacatgattccatatgtgttatttcatagtttttatgtcttcactattattctacaatgtagaaaatagtcaaaataaagaaaacccttgaatgagtaggtatgtccagacctttgactggtactgtatatatatcagtagagcctgctgaggggagaacagctaataataatggctggaatggagtgaatggaatggtatcaagaacatggttttcatgtgttttattccactccattccagtcattattatgagccgtcctcccctcagcagcctccactgatatttATATAGAgagagtccagtccagtccaatCCAATCTGTTGCTCGGAGGTCTGGCTGTAACAACCATGctttctgttctgtctgtccttAATGATCCTGGTTGTAAAATACAGTCTTATACCTTACAGCACTTGAATGACTTTAGACTGTAGCATCTCCCTCATTTAGACTTTTCCATGCTGGCAGAATGTTTGTAAACGTCATGACAAAAAGGAATAAACAATTCAACAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253049 True 2602 lncRNA 0.40 1 8211641 8214242

Neighbor

gene id symbol gene type direction distance location
si:dkey-246i14.3 LOC106570832 coding downstream 371166 7744358 ~ 7840475 (-)
LOC110520788 LOC106593005 coding downstream 594448 7577008 ~ 7617193 (-)
LOC110508498 NA coding downstream 636027 7573853 ~ 7575614 (-)
LOC110508494 LOC106575071 coding downstream 638122 7554786 ~ 7573519 (-)
LOC110508481 LOC106573839 coding downstream 659614 7531548 ~ 7552027 (-)
LOC110520794 LOC105024462 coding upstream 350 8214332 ~ 8243743 (-)
LOC110520844 LOC106605887 coding upstream 252694 8466936 ~ 8495390 (-)
LOC110520892 LOC106605923 coding upstream 484793 8699031 ~ 8703263 (-)
LOC118964373 NA coding upstream 487221 8701463 ~ 8701598 (-)
LOC118964372 NA coding upstream 487641 8701883 ~ 8702017 (-)
G221708 NA non-coding downstream 27425 8178723 ~ 8184216 (-)
G221707 NA non-coding downstream 28080 8175399 ~ 8183561 (-)
G221702 NA non-coding downstream 44849 8166259 ~ 8166792 (-)
G221701 NA non-coding downstream 46868 8164457 ~ 8164773 (-)
G221667 NA non-coding downstream 94940 8115184 ~ 8116701 (-)
G221719 NA non-coding upstream 10758 8225000 ~ 8225310 (-)
G221720 NA non-coding upstream 38992 8253234 ~ 8254152 (-)
G221734 NA non-coding upstream 47908 8262150 ~ 8262373 (-)
G221736 NA non-coding upstream 50279 8264521 ~ 8264724 (-)
LOC110508472 LOC106573847 other downstream 681324 7528026 ~ 7530317 (-)
LOC110508454 s10ag other downstream 687149 7517195 ~ 7524544 (-)
LOC110520792 LOC106575505 other downstream 775470 7408252 ~ 7436195 (-)
G220751 NA other downstream 1010220 7176392 ~ 7201421 (-)
G221788 LOC106574877 other upstream 135077 8345683 ~ 8350289 (-)
G221806 NA other upstream 180119 8394361 ~ 8410809 (-)
G221807 adar other upstream 288942 8503184 ~ 8523208 (-)
G221986 NA other upstream 548877 8763119 ~ 8763884 (-)
LOC110520835 ash1l other upstream 590455 8804651 ~ 8839679 (-)

Expression


Co-expression Network