G221807 (adar)


Basic Information

Item Value
gene id G221807
gene name adar
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 8503184 ~ 8523208 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253214
TTACAAAGCCGGTCTTTATAATCACTTAAAACTTGACAGAATTTCCATACATAATAAAACAAAATGCTTTCTGTCATCCATTTGATAAAACGTTTCAAAAAAATAGTTAATAGAAAATCAATTTTAGGCATGACTTACaaaatatatacataatatatacatatacatacacacacagagatatatacaTACCCTACACAAACATTGTTATTGCATATACATCTGTGTATTTATGTATTTGTATGTACATGATGTATATATTGCTTCACCCTTGAATGTATTTGATCAGACTGAactaaaacataaaaacaaacCAGTCTTTCTCCCTGTCCACATAAAACCTGCCGGCCACATTCTGGCCACGCTAGGAAGGACAAGAGTGCAAAGCCATCTCTTTTTTTTATCACAACTACGAGTAATCACTTATCCTAACCTGAACTTTGACCCCCCCTAACATGAATCCTAAAATGAGAACAAGTAGCTGATTTACTTGTTCTCAGCAGTTCTCAACGTCACCGTTGTCCTTTCTGACGTGGCCCTCGAGTGGCAACACCAAAAACCTCAAGAACAATAGCGATACACACCACATAGGACACAACAATAACAGAATAATTATGATCTAGGCTAGTTAGTCATCATCAAATCTATGTTACAGTCGAGAGTTATGGGATGGACCAGGCTGTGACCTGTAGACGTAGCCATAGCATTAACAACAGTGTAAAGGGGTGGGTTACTAGGTCGGGGAGTAGCTAAACGTTACAAGgctggtttatatatatataaagtgtgATCACTACTATCCATGCTCAGGCTGATAAGTACAGATTAAACTAGTCATGCGTGATTGAATGGCTGGCTGGCGAGTAGGACAGGGTCAGGTGTAGGGTGTCTGAACTAGAGAGACAGGGCTGTGTGCGTGAGGGCAGGGAGGGTTTGTCCTGTAGGTAAATGTGAGGATAGAGTGTCCTGGGGCTACTGTTACAGTGGAGCAGTAGTGCATGCTATGCAGCTCTGAATGTCACCACATCACAGTCATCATGCTTACTATCCCCctattctcccctctctttctatatTCTGTTGCTTTTGTGTAGCAGTAGcaaccccttctctctccatctctcttgctGCTGTCTGACCCTCACCCCTTGGGCTGGCCTGTtatccccttccctccctccatctcagtAACTCTGTCCTTTCCAATCTGTCTGACCTCTACCCCTTCTTTCCAGTACTTGCTGctagctcctctgtcctctcctcccttccccccctgtCCTCCAGGATCATGTCCTTCTATCCCTAGCcaaccctcccttctccctcctttctACATGGCCTGTGTGTACGCACTACTACCCCACTGGCTGCTGTTATAGTCAGTGGTTGTGCTTCCATagctattgttgttgttgtatccCTGGTTGCTATTAGCAACACTTCCTGCCCCTTGGCCATCGGAGGCCGCCGCTTCGTCAAAGCTCTTCTCCTCCAATGGCTTGCCAATCCAGGCACCGTAGCCATGGCTACCGAGCGCATCGAAGAACTGCTGCTTGGCGACCTGGAAGGACATGGCGGCCATCTTGGCTTGGGCGTAAGACGGGAGAGCCAGCAGGTCCTGGCGCCCGCACTGTTGGCATAACGACCGGAATTGACGGAAGATATTGGACTTGGAGACCCGCGACACGTCCAGTTTGGGGCTGGTGCTGCTATCTGGATGAGGGTGGATGAGGTCTGAGGGTCTGGTTCTAGTTGTGGTGCGGGGTGCGTACCCGTCCAGTTTGCCCTTGGTCCCATCCAGCACCTCCACAGTGATGTGGTCTGGCTGGCTCCAGTTCACGCTGGACTCCTTGGTCTTCCCTGTGTGACGCGTCGAGTCATACACACTCACCCTGCCCACctcggggtggttgagtgtGTAGGGAGCAGGTAGACTCTTGGAGAAGGCTTCGCCGTCTCTGGCCAATCGGCAGCAGACAGCACGTGTCAGGTGGCCATGGCTGTACAGGTAGCCCAGGGTGATTGAAGCCAGGTAGATAGGATGGAGGAAGTGGGAGAGCAGGGCTCCCTGCAGACCCAGGACGTTCCAGCGAAGGATCTTGTCGCTACAGCTCATGGTCCTCAGACGCTCGCCGTGCTGGATGCCGTCCCAGGTGGGCACGATGGTCGATGACTCTACCGGGATGGTGCCCTCACCATTCTCCACCTTGGTGCGCAGCTTGCCCTGCTTGGCGTTCTCAAACAGGGGCTGGTGGCCCTGGCCGTCCCCCGCGTCCTCGCTGCACGACTTATCAAACAACGCCCCGTCTCCGCACGGAGCAGTACTGATATAGAGGTGGAAGGTGGTGTCAGGTTTGATCCGGAGCTTGTTCTCCTCAGCTGGCTCAAATATGCTGTCCTCTGACCCTTCACAGTGCTTCAGCAACTCAGCATATAGAAAcCTGATAAATCCTCTCCTGGAGATGATTTCTGCGTGGCAGTCATTAACGGTGTCCCCTTTAAGACTCAGCTCCTCCCCTTTAACACAGCGATTTCctgttcccaGACTGACCACGGTCCCCAGCCCTTCCCCCCTCTTCATGACGATGGTGGCGAGGATCTTCCTTCCCAGAAGACTGTGCTGTATGCGTGTGGTGAGGGCGTTGAAGCGCTGGTGACTCAACATGGCGATCTGGTCATGGATTGTCCCACCACTCAGTGGCAGCTCTGCAGGGGTTAGTTCCCCGGTGCGGGCAGCCTTCTCTGCCTCTCCAATCAGAACCCTCAGAGCTGCATCAGCTGCTTCCTGTTTCCCTTGCTTCTTATTGGAAGCACAGACAGGAGGGAACCAGCGACCCCCTAGTTTAGCCTGGTAGGTAaacTTGGGCTCGTGCGGTGGTCCTGACTGCCCGACCAGTCGTATCTCTGCAGCGAAACCCCTGGCCCGGGCGTACTCCAGCAGACCTGACACAGCGTTGTTGTTTAGGTGGCTGATAAGGTCACCAACCCCCGCCTCGTGGGCAGAACGCAGCTCCTCCTCTGTCAGCGGGGGCAGGGAGGGGCAAGCGGGCATGAAGCCCCCTTCATCACCAGACAGACACAGGGGAAACTGGGGCTTGTTGAGCTGCAGTCTCCCGTCGGCCATTAACTCCTTGACTGCCTCCTCTGCAGCCAGCTGCCGGGCAGCCTTCTTACTGGGGGCTGAGCTCTCAGCACACAGGCTTTCCCCGATCTTCACCCTGAACATGAACCGTGGGTCGTGAGGTGGGCCCTCCTGTCCAGTGTTGATGAACTCAATGGGGTTTCCAGTGCGCTGACTGTACTCCATCAGCATGGACACGGGGTTCTTACCCCCCGGCAGGGAACGGGACAGGGCCTGGGGCGGACCCTCCACCACCtcAGGGACGTCAGAGGTGGGGTCCATGGCCTGGTCCACCCCTGCAGTGAGCCCCTCCTCAgcccctcccccctctatctcaCGCAGCAGAATCCTCAGGGTTGCTGCCGCAGCATCTTTCTTAGCCACCTTTTTATTAGATGCCTCAGCAACAGGAAACAACCTGCCGTCCAGCATGACCTGCATACGGAATCTGGGGTCATGTGAGGGCCCTGATTGGTCGAGGAGCAGGAACTCGCAATTGTGTCCCTGGTACTGGGCAAACTCCATCAGGCCGCTGACGGGGTTCTTGGCCCTCACCTCCTGGAGTTTGGCACGGAGGTTCTGAGGTGGGGGCGCTGCCAGGGAGACTGCTACTGTCCCCCCTCCATCCCGGCTGATGGCGTTGAGGAATTCGGGGATATCGTCGGTCGCCCACTGCCCTCCGTTCGACTCATCCTCCGCCTCAGCGTTGGCCTCTAGACACTCCAATCCGGGTGGCACCGCTTGGAATCCAGACCCCATTCCTTCGACCTTTGCAGGGGCGCTGCGCTCGGCCTTGAggctcctctccatcctctccctgcGATGGACAGATAGCTCCCAGATGTGAGGGGTCACCTCTGCGTTGCGGCTCACGTCGCCCTGCTTCTCCATGGCGTACAGGGTGGGGTTGACCTGCTTGGCGCCCCTCAGGCCCAGGTTCTTGGAGATCACCAGGGCCGTGGCCTCCCCTGCCTCCAGCAGATACTGCAGGATCAACTCCTTCTGATTACTGCCGCAGTCCGCCATGTCGCTCTCGTCAAGGTCTAGGTCAAGCTCTTCGTTACTGCTGCTGTTGATACTGGGTTGTTGGGTTTGGGACTGGGAATGTTGCCGATATGACTCAGATGGTTCTGAGGAAGAGGAGTGTGAATCAGATTCTACGTAGTAATCTTCCTCTTTGTCGCCCTCAGGACCCTGCGCTTCAATTTGCTGGATCTCAGCGTCGATGGCAACGTCCTCCTCCTTCACAGACAGGAAGTGAGAGCAATCTTCTTCTGAAGGCCTTTGCTGTGACTCCACTGGATGTTCCCTCGGTTGGGAACGTGGGCTTTCCGGATCAGAATCTCTACTTTCCGGTTCTTCCTGTGGTTCTACGTAGACAGTCCACTCCGGAGGACTTTCACCGTGTTTTGAAGCTTTCTTATCACGCTCGAGACCGTAAAGGGCCTGGTTGATAAACTTTTTGGGCAACCGCAGCGTTTTTGCCAAACACTTTGCTTGTAGCTTCTCACCGGGGCTCAAATCTGCCAAGGCTTGTAAAACTTGCTCTCGGATGTCAGGTGGCTGAAATGTAGGGACACTCTTGTTGTTTGAATTATTACTACTACCAACAGAAGCTTTGTCAAAGCTGTCGCCTCGGTCAACTCTTCCTCTGTAGGACCTCTCTCTGTCTAAGGATAAACTCTGAAAGCCTTCTGAGAAAGACGGCCCGTCAGCACAGTCTGCATGAAGGCTCCACTGTCTGTTGAAGCCTTGCTTTTGTGTTGAAGTCTGCTTCTGGTTCCAGAATCTAGGGCCGGTTGGTCCTCTAGGGGGTCCCTGACAGTGCGGGTACCCGAAGTCCCTACCGTTCCCTCTGCCTCGCTCGCTGctgtatccccctctccccctagAGCTGTTTTGGGAGTACCTGCTGTACCCTGCCTGGGTCTGGTTCGATTCGTTATAGAGTCCGTTCGGTCCCCCTCGACCCAAGCTCTGCGCCCCTCCTCTGGGGCTCACCCTAAACTGGGGAGCCTCAGTGTTCTGTCCCCTCAGGAAGTGGACCTGCTGCTGCCTGAAGGAGTTAGGACCACTGGGACAAGAGCTCTGCTGACTCAGGGCTGGGCTGTGACCGGgtgggggagggacagaggggtagagaggctgAGAGTGGGCACTGGGTGGTACTAGAGGGGGAACTGGGCCCAGGTATGAATGGACGTTTGGGTGTGGGGCCTGTTGCGGGGGGGCTCTGGGGTTAAATCCCAGGGGTCCAGCTCTGTAGTATTGATGCTTAGCCTGCAGTTGGGGGAGAGGGGGTCGGTGGTAATGCTCTATGGGGGGCCCTCCTCGTCCTCTGCTCATAGCGCAGGGGGCAGGTTGAGGGGGGACCAGGGCCGCCTGTTACGCAGCAgataggaggatgtgtctctgtgttggatACTGATGCAACAACACAGTCAGGCAGAACAACCGGGTGGGCGATGAACGCAAAGTGGCAG

Function

symbol description
adar Predicted to enable double-stranded RNA adenosine deaminase activity; double-stranded RNA binding activity; and tRNA-specific adenosine deaminase activity. Predicted to be involved in RNA processing and adenosine to inosine editing. Predicted to act upstream of or within defense response to virus. Predicted to be active in cytoplasm and nucleolus. Is expressed in brain. Human ortholog(s) of this gene implicated in Aicardi-Goutieres syndrome; Human papillomavirus infectious disease; dyschromatosis symmetrica hereditaria; and liver cirrhosis. Orthologous to human ADAR (adenosine deaminase RNA specific).

NR:

description
double-stranded RNA-specific adenosine deaminase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253214 True 5607 TUCP 0.54 15 8503184 8523208

Neighbor

gene id symbol gene type direction distance location
LOC110520844 LOC106605887 coding downstream 7794 8466936 ~ 8495390 (-)
LOC110520794 LOC105024462 coding downstream 259441 8214332 ~ 8243743 (-)
si:dkey-246i14.3 LOC106570832 coding downstream 662709 7744358 ~ 7840475 (-)
LOC110520788 LOC106593005 coding downstream 885991 7577008 ~ 7617193 (-)
LOC110508498 NA coding downstream 927570 7573853 ~ 7575614 (-)
LOC110520892 LOC106605923 coding upstream 175827 8699031 ~ 8703263 (-)
LOC118964373 NA coding upstream 178255 8701463 ~ 8701598 (-)
LOC118964372 NA coding upstream 178675 8701883 ~ 8702017 (-)
LOC110520835 ash1l coding upstream 281443 8804651 ~ 8839679 (-)
LOC110516769 LOC100136250 coding upstream 330607 8853815 ~ 8862231 (-)
G221863 NA non-coding downstream 25358 8477456 ~ 8477826 (-)
G221855 NA non-coding downstream 38638 8461540 ~ 8464546 (-)
G221852 NA non-coding downstream 45703 8454161 ~ 8457481 (-)
G221835 NA non-coding downstream 77067 8425678 ~ 8426117 (-)
G221825 NA non-coding downstream 89154 8413662 ~ 8414030 (-)
G221896 NA non-coding upstream 44464 8567672 ~ 8570629 (-)
G221922 NA non-coding upstream 85929 8609137 ~ 8611384 (-)
G221880 NA non-coding upstream 105475 8628683 ~ 8630117 (-)
G221952 NA non-coding upstream 158304 8681512 ~ 8682295 (-)
G221960 NA non-coding upstream 170166 8693374 ~ 8693897 (-)
G221806 NA other downstream 92375 8394361 ~ 8410809 (-)
G221788 LOC106574877 other downstream 152895 8345683 ~ 8350289 (-)
LOC110508494 LOC106575071 other downstream 929712 7554786 ~ 7573519 (-)
LOC110508472 LOC106573847 other downstream 972867 7528026 ~ 7530317 (-)
LOC110508454 s10ag other downstream 978692 7517195 ~ 7524544 (-)
G221986 NA other upstream 239911 8763119 ~ 8763884 (-)
G222023 LOC100136250 other upstream 330609 8853817 ~ 8949187 (-)
G222465 NA other upstream 569972 9093180 ~ 9095216 (-)
LOC110501040 LOC106605812 other upstream 587765 9101425 ~ 9118437 (-)

Expression


Co-expression Network