Gene
RNA
| Item | Value |
|---|---|
| gene id | G221439 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 8567677 ~ 8569484 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: phosphofurin acidic cluster sorting protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU252737 | True | 1101 | lncRNA | 0.45 | 2 | 8567677 | 8569484 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| adar | adar | coding | upstream | 44460 | 8499728 ~ 8523217 (+) |
| LOC110520873 | LOC106605892 | coding | upstream | 110185 | 8436132 ~ 8457492 (+) |
| LOC110520795 | LOC106594151 | coding | upstream | 146658 | 8417943 ~ 8421019 (+) |
| LOC110520859 | LOC106606012 | coding | upstream | 149767 | 8415151 ~ 8417910 (+) |
| LOC110520854 | LOC106606011 | coding | upstream | 152797 | 8412654 ~ 8414880 (+) |
| LOC110520869 | LOC106605894 | coding | downstream | 61922 | 8631406 ~ 8637366 (+) |
| LOC110520861 | LOC106605898 | coding | downstream | 69560 | 8639044 ~ 8657683 (+) |
| LOC110520797 | LOC106605883 | coding | downstream | 111029 | 8680513 ~ 8684783 (+) |
| LOC110520846 | LOC106605923 | coding | downstream | 117053 | 8686537 ~ 8703190 (+) |
| LOC110520870 | rab13 | coding | downstream | 134226 | 8703710 ~ 8714435 (+) |
| G221303 | NA | non-coding | upstream | 29256 | 8501737 ~ 8538421 (+) |
| G221312 | NA | non-coding | upstream | 49009 | 8515450 ~ 8518668 (+) |
| G221406 | NA | non-coding | upstream | 55298 | 8511779 ~ 8512379 (+) |
| G221394 | NA | non-coding | upstream | 87568 | 8479302 ~ 8480109 (+) |
| G221441 | NA | non-coding | downstream | 4446 | 8573930 ~ 8669515 (+) |
| G221458 | NA | non-coding | downstream | 41718 | 8611202 ~ 8642621 (+) |
| G221415 | NA | non-coding | downstream | 59180 | 8628664 ~ 8630089 (+) |
| G221499 | NA | non-coding | downstream | 109012 | 8678496 ~ 8678798 (+) |
| G221299 | s10i | other | upstream | 78610 | 8399071 ~ 8489067 (+) |
| LOC110520790 | LOC106606111 | other | upstream | 395454 | 8170634 ~ 8178058 (+) |
| LOC118945274 | LOC106575512 | other | upstream | 1119800 | 7437011 ~ 7447882 (+) |
| G220445 | LOC106575489 | other | upstream | 1186114 | 7378258 ~ 7381563 (+) |
| G220435 | NA | other | upstream | 1202392 | 7359668 ~ 7365285 (+) |
| G221514 | NA | other | downstream | 159493 | 8728977 ~ 8732478 (+) |
| LOC110520796 | fam189b | other | downstream | 191850 | 8715996 ~ 8766590 (+) |
| LOC110520836 | LOC106605888 | other | downstream | 204563 | 8772336 ~ 8800464 (+) |
| G221526 | LOC106591640 | other | downstream | 270740 | 8840224 ~ 8908728 (+) |
| G221525 | LOC106605893 | other | downstream | 278352 | 8847836 ~ 8878616 (+) |
