G221962 (LOC106605922)



Basic Information


Item Value
gene id G221962
gene name LOC106605922
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 8694567 ~ 8694802 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU253393
GAGAACTCTGCCATGGGATGCAGAGCAGATAGCACCAGGAAAGACACTGGGCAGTGGAACGCAGGCAGGTACGGCAACTGTACCAAACGTCCGGAGAGAGGTAgcgacagagcagagagagggaggacagggacgGGGGACTGGCCCcgcagagaggctgagagagcgacggagacagagagggaggagaggaggtggaggacggAGTCTGACTGGGGACGGACAGAGACTCTGCA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU253393 True 236 lncRNA 0.61 1 8694567 8694802

Neighbor


gene id symbol gene type direction distance location
LOC110520844 LOC106605887 coding downstream 199177 8466936 ~ 8495390 (-)
LOC110520794 LOC105024462 coding downstream 450824 8214332 ~ 8243743 (-)
si:dkey-246i14.3 LOC106570832 coding downstream 854092 7744358 ~ 7840475 (-)
LOC110520788 LOC106593005 coding downstream 1077374 7577008 ~ 7617193 (-)
LOC110508498 NA coding downstream 1118953 7573853 ~ 7575614 (-)
LOC110520892 LOC106605923 coding upstream 4233 8699031 ~ 8703263 (-)
LOC118964373 NA coding upstream 6661 8701463 ~ 8701598 (-)
LOC118964372 NA coding upstream 7081 8701883 ~ 8702017 (-)
LOC110520835 ash1l coding upstream 109849 8804651 ~ 8839679 (-)
LOC110516769 LOC100136250 coding upstream 159013 8853815 ~ 8862231 (-)
G221961 NA non-coding downstream 193 8693991 ~ 8694374 (-)
G221960 NA non-coding downstream 670 8693374 ~ 8693897 (-)
G221952 NA non-coding downstream 12272 8681512 ~ 8682295 (-)
G221880 NA non-coding downstream 64450 8628683 ~ 8630117 (-)
G221922 NA non-coding downstream 83183 8609137 ~ 8611384 (-)
G221963 NA non-coding upstream 42 8694844 ~ 8695076 (-)
G221964 NA non-coding upstream 609 8695411 ~ 8695965 (-)
G221967 NA non-coding upstream 10199 8705001 ~ 8705540 (-)
G221975 NA non-coding upstream 24038 8718840 ~ 8722818 (-)
G221807 adar other downstream 171359 8503184 ~ 8523208 (-)
G221806 NA other downstream 283758 8394361 ~ 8410809 (-)
G221788 LOC106574877 other downstream 344278 8345683 ~ 8350289 (-)
LOC110508494 LOC106575071 other downstream 1121095 7554786 ~ 7573519 (-)
LOC110508472 LOC106573847 other downstream 1164250 7528026 ~ 7530317 (-)
G221986 NA other upstream 68317 8763119 ~ 8763884 (-)
G222023 LOC100136250 other upstream 159015 8853817 ~ 8949187 (-)
G222465 NA other upstream 398378 9093180 ~ 9095216 (-)
LOC110501040 LOC106605812 other upstream 416171 9101425 ~ 9118437 (-)

Expression



Co-expression Network