Gene
RNA
| Item | Value |
|---|---|
| gene id | G221967 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 8705001 ~ 8705540 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: cadherin-12 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU253399 | True | 288 | lncRNA | 0.44 | 2 | 8705001 | 8705540 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520892 | LOC106605923 | coding | downstream | 1738 | 8699031 ~ 8703263 (-) |
| LOC118964372 | NA | coding | downstream | 2984 | 8701883 ~ 8702017 (-) |
| LOC118964373 | NA | coding | downstream | 3403 | 8701463 ~ 8701598 (-) |
| LOC110520844 | LOC106605887 | coding | downstream | 209611 | 8466936 ~ 8495390 (-) |
| LOC110520794 | LOC105024462 | coding | downstream | 461258 | 8214332 ~ 8243743 (-) |
| LOC110520835 | ash1l | coding | upstream | 99111 | 8804651 ~ 8839679 (-) |
| LOC110516769 | LOC100136250 | coding | upstream | 148275 | 8853815 ~ 8862231 (-) |
| LOC110520884 | LOC100136250 | coding | upstream | 173448 | 8878988 ~ 8887653 (-) |
| LOC110520883 | LOC100136250 | coding | upstream | 206899 | 8912439 ~ 8921058 (-) |
| LOC100136250 | LOC100136250 | coding | upstream | 233280 | 8938820 ~ 8949179 (-) |
| G221964 | NA | non-coding | downstream | 9036 | 8695411 ~ 8695965 (-) |
| G221963 | NA | non-coding | downstream | 9925 | 8694844 ~ 8695076 (-) |
| G221962 | LOC106605922 | non-coding | downstream | 10199 | 8694567 ~ 8694802 (-) |
| G221961 | NA | non-coding | downstream | 10627 | 8693991 ~ 8694374 (-) |
| G221975 | NA | non-coding | upstream | 13300 | 8718840 ~ 8722818 (-) |
| G221987 | NA | non-coding | upstream | 58446 | 8763986 ~ 8767476 (-) |
| G221988 | NA | non-coding | upstream | 65024 | 8770564 ~ 8771933 (-) |
| G222007 | NA | non-coding | upstream | 96411 | 8801951 ~ 8803019 (-) |
| G222009 | NA | non-coding | upstream | 97565 | 8803105 ~ 8803666 (-) |
| G221807 | adar | other | downstream | 181793 | 8503184 ~ 8523208 (-) |
| G221806 | NA | other | downstream | 294192 | 8394361 ~ 8410809 (-) |
| G221788 | LOC106574877 | other | downstream | 354712 | 8345683 ~ 8350289 (-) |
| LOC110508494 | LOC106575071 | other | downstream | 1131529 | 7554786 ~ 7573519 (-) |
| LOC110508472 | LOC106573847 | other | downstream | 1174684 | 7528026 ~ 7530317 (-) |
| G221986 | NA | other | upstream | 57579 | 8763119 ~ 8763884 (-) |
| G222023 | LOC100136250 | other | upstream | 148277 | 8853817 ~ 8949187 (-) |
| G222465 | NA | other | upstream | 387640 | 9093180 ~ 9095216 (-) |
| LOC110501040 | LOC106605812 | other | upstream | 405433 | 9101425 ~ 9118437 (-) |
