G221987


Basic Information

Item Value
gene id G221987
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 8763986 ~ 8767476 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253421
GCAACATTAAATCTGTGGTTCCATAAGAATAGAATAAAATGGAATAGCGCATTTCTATAAAATGTTTAACCTAGCTACACATTTTgaacacattacacacattaaCACTTTCATGTTGTGGATCATTTATTCAATATGTTGAAATACATGACTTGCATTAAAAGTTCTTGCATTAGAACATTTATGTATCATATTTGAAGAGAATAATATGTTTATTCAGTTAGGCTCTATCACTTCAAGCCATACAATTATACAATGTGCAAGATAGGAGGTAGAAATTATAGCAACAGTTTTAACACAGCTCAGTGCttctgtgtgtttgagtgtgtgtgtgtgtgtgtgtttgagtgtgtgtgtgtgtgtgtgtggttgtgtgtctgtgtgtgggtgtaccTGTGTGTTGTGTTTAAATCAGTTACATACATAATTGTGTGTATATTCGCCATTGAGTGTATAACTCTTGTCCGACTGGGTTGAGGTTAGCCAACTTTCTATTCCAATCCAGACAGTATGTCCTCTAAGAATACTGCATGCTTTATGTTGTCCAACCTCCAGTATCAGACTATAATATCCAGATTCTCATAGTTCCCACTAAGTCTTGGTGGAACTACCATCCTGAATATCTGATCTCCAACATCTATACAAACGTATCTGTACATTTATTGCAAGAATCTCTTTAGTGCTTTGGGAATCCTACTGAGGTGTAATTGATCAGACATAATCGTTCAGCCAGAGCCAGACACATCACAGAGTTCATGGATGATAGTTAGTTAGAACCCAGTATATCTACGGCTCTGGGTTTAACAGCACAACATTGATCCATCCCCTTCACTAGACATTAACACATTTCCAAAGGCTCAGAGCAACTAGGTTTTgggtgcaagagagagagagagaaagggagaaaagtAAGAAGCATTGCCAAAACATGCAGCTAAAGTCATTCTTAGGGGAAGGTTGGTTATTTTGTAGGATTTGATCCACAGGGAGGGAAGTTGTAGTATTTCAACAAGGCTCCTGTTTCATTTGGAGTACATTATGGGGGGTTGTACCATAACATACAAATCAAATCGCTATGTCCAAGGTCATCTCAGAGACAGGAAATGCCGAGTTTAGGAGTATGATGTCTTAGACCGGTGTAATAAGAGtcagttttgagtttggggcagatggtgtgtgagttttgagtttggggtagatggtgtgtgagttttgagtttggggtagatggtgtgttagCTTTGAGTTTGAGGCACCTTTCTTCTGAAGGCAGATTGGAGATGGACTAGGTAAGGGCTGTTGATGATTACATCTTGATTTTACCTCAAGAAAATgaaccacaaaaaaaaaagactaaaATAATAACGATGTAAGTTTGTAAACATACGGCGAAACTAGCAGGCCATTAAACTTTCACTGTCAGTGGGCAAAACGAGTGTACATTTTTCTGTACATTTTACAGTGTCATCAGGAGAAAAGGAAGGTTAACCATTTCAGATGAAGACAAAAAGGTGAGTTCCGTGAACACTTAGTGAATTTCGCTCCGGATGAAGAGCTGGACAAATGAACGTACATTTGAGTTTTGAAAAAGAGTGAGCAGTTTAATGAGTGTATGCGGTTCGTGTAAGAGTGATGTTCACAGCTCCAGAAAAGTGTTTACCttagacacagatctaggatcagcttatgCTCCActgatcctaaccttaaccattacgaGGAGAAACACTAAACTGACCATAGCTCAGAGTCTAGGGGAAACTTCATTATCctactccttctctccatcctctctactCTTGAAGTTAGAGAGAGATCCTAGAGAGTTGGAGAGGACAGATAGAGTTGTTTTCAGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253421 True 1858 lncRNA 0.39 5 8763986 8767476

Neighbor

gene id symbol gene type direction distance location
LOC110520892 LOC106605923 coding downstream 60723 8699031 ~ 8703263 (-)
LOC118964372 NA coding downstream 61969 8701883 ~ 8702017 (-)
LOC118964373 NA coding downstream 62388 8701463 ~ 8701598 (-)
LOC110520844 LOC106605887 coding downstream 268596 8466936 ~ 8495390 (-)
LOC110520794 LOC105024462 coding downstream 520243 8214332 ~ 8243743 (-)
LOC110520835 ash1l coding upstream 37175 8804651 ~ 8839679 (-)
LOC110516769 LOC100136250 coding upstream 86339 8853815 ~ 8862231 (-)
LOC110520884 LOC100136250 coding upstream 111512 8878988 ~ 8887653 (-)
LOC110520883 LOC100136250 coding upstream 144963 8912439 ~ 8921058 (-)
LOC100136250 LOC100136250 coding upstream 171344 8938820 ~ 8949179 (-)
G221975 NA non-coding downstream 41168 8718840 ~ 8722818 (-)
G221967 NA non-coding downstream 58446 8705001 ~ 8705540 (-)
G221964 NA non-coding downstream 68021 8695411 ~ 8695965 (-)
G221963 NA non-coding downstream 68910 8694844 ~ 8695076 (-)
G221988 NA non-coding upstream 3088 8770564 ~ 8771933 (-)
G222007 NA non-coding upstream 34475 8801951 ~ 8803019 (-)
G222009 NA non-coding upstream 35629 8803105 ~ 8803666 (-)
G222025 NA non-coding upstream 85484 8852960 ~ 8912310 (-)
G222059 NA non-coding upstream 185948 8953424 ~ 8953678 (-)
G221986 NA other downstream 102 8763119 ~ 8763884 (-)
G221807 adar other downstream 240778 8503184 ~ 8523208 (-)
G221806 NA other downstream 353177 8394361 ~ 8410809 (-)
G221788 LOC106574877 other downstream 413697 8345683 ~ 8350289 (-)
LOC110508494 LOC106575071 other downstream 1190514 7554786 ~ 7573519 (-)
G222023 LOC100136250 other upstream 86341 8853817 ~ 8949187 (-)
G222465 NA other upstream 325704 9093180 ~ 9095216 (-)
LOC110501040 LOC106605812 other upstream 343497 9101425 ~ 9118437 (-)
G222607 LOC106574954 other upstream 727320 9494796 ~ 9496853 (-)

Expression


Co-expression Network