G221580


Basic Information

Item Value
gene id G221580
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 8953799 ~ 8954033 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU252913
ATAATTGACAACAGGAAAAAGTGATATTTAGTTAGTAGTTGCATTCTGGTAATGAAGTTGGTTATAGAGGAAGTCCATGTTACAGGTTCTTTTATCTCAGTTGGTAATGTATGGAGCTTGTAACGCAGGGTAGTGGGTGAGATTCCCGGAACCACCAAAATACCTCAAATCTATGcacgctttggataaaagtgtctgctaaatggcatatattataacAGTAATCTGTTTTCTC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU252913 True 235 lncRNA 0.37 1 8953799 8954033

Neighbor

gene id symbol gene type direction distance location
LOC110517169 LOC106605893 coding upstream 15101 8932771 ~ 8938698 (+)
LOC118945318 LOC106575331 coding upstream 27742 8898021 ~ 8926057 (+)
LOC110520801 LOC106605893 coding upstream 41489 8906566 ~ 8912310 (+)
LOC110516768 LOC106605893 coding upstream 75146 8865764 ~ 8878653 (+)
LOC110520850 LOC106605893 coding upstream 100110 8840190 ~ 8853689 (+)
LOC110520813 LOC106605815 coding downstream 28561 8982594 ~ 8987846 (+)
LOC110520819 LOC106575022 coding downstream 509304 9463337 ~ 9483086 (+)
LOC118944441 NA coding downstream 531567 9485600 ~ 9486125 (+)
LOC110520820 LOC107573682 coding downstream 536300 9490333 ~ 9508263 (+)
LOC118945352 NA coding downstream 658861 9612894 ~ 9622952 (+)
G221579 NA non-coding upstream 19 8953446 ~ 8953780 (+)
G221534 LOC106578276 non-coding upstream 30302 8920679 ~ 8923497 (+)
G221567 NA non-coding upstream 34539 8886327 ~ 8919260 (+)
G221525 LOC106605893 non-coding upstream 75183 8847836 ~ 8878616 (+)
G222062 NA non-coding downstream 1738 8955771 ~ 8956027 (+)
G222063 NA non-coding downstream 6745 8960778 ~ 8961075 (+)
G222065 NA non-coding downstream 16955 8970988 ~ 8971364 (+)
G222069 NA non-coding downstream 19063 8973096 ~ 8973725 (+)
G221526 LOC106591640 other upstream 45071 8840224 ~ 8908728 (+)
G221539 NA other upstream 89823 8861500 ~ 8863976 (+)
LOC110520836 LOC106605888 other upstream 178849 8772336 ~ 8800464 (+)
LOC110520796 fam189b other upstream 190210 8715996 ~ 8766590 (+)
G222089 NA other downstream 81325 9035358 ~ 9035833 (+)
G222102 NA other downstream 113113 9067146 ~ 9068151 (+)
G222287 NA other downstream 491014 9445047 ~ 9445704 (+)
G222345 LOC106594812 other downstream 652272 9606305 ~ 9611139 (+)

Expression


Co-expression Network