G222065


Basic Information

Item Value
gene id G222065
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 8970988 ~ 8971364 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253539
cccacttcaggtactgtcccaccttctatagcatggcccacttctggtactgtaccaccttctaaagcatggcccatttcaggtactgtaccaccttctatagcatggcccacttcaggtactgtaccaccttctaaagcatggcccatttcaggtactgtaccaccttctatagtatggcccacttcaggtactgtcccaccttctatagcatggcccacttcaggtactgtaccaccttctatagcatggcccacttcaggtactgtaccaccttctaaagcatggcccatttcaggtactgtaccaccttttATAGCattgcccacttcaggtactgtactgtccctCTTTCTATAGTATGCCCCACTCcaggt

Function

NR:

description
PREDICTED: uncharacterized protein LOC105910437

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253539 True 377 lncRNA 0.49 1 8970988 8971364

Neighbor

gene id symbol gene type direction distance location
LOC110517169 LOC106605893 coding upstream 32290 8932771 ~ 8938698 (+)
LOC118945318 LOC106575331 coding upstream 44931 8898021 ~ 8926057 (+)
LOC110520801 LOC106605893 coding upstream 58678 8906566 ~ 8912310 (+)
LOC110516768 LOC106605893 coding upstream 92335 8865764 ~ 8878653 (+)
LOC110520850 LOC106605893 coding upstream 117299 8840190 ~ 8853689 (+)
LOC110520813 LOC106605815 coding downstream 11230 8982594 ~ 8987846 (+)
LOC110520819 LOC106575022 coding downstream 491973 9463337 ~ 9483086 (+)
LOC118944441 NA coding downstream 514236 9485600 ~ 9486125 (+)
LOC110520820 LOC107573682 coding downstream 518969 9490333 ~ 9508263 (+)
LOC118945352 NA coding downstream 641530 9612894 ~ 9622952 (+)
G222063 NA non-coding upstream 9913 8960778 ~ 8961075 (+)
G222062 NA non-coding upstream 14961 8955771 ~ 8956027 (+)
G221580 NA non-coding upstream 16955 8953799 ~ 8954033 (+)
G221579 NA non-coding upstream 17208 8953446 ~ 8953780 (+)
G221534 LOC106578276 non-coding upstream 47491 8920679 ~ 8923497 (+)
G222069 NA non-coding downstream 1732 8973096 ~ 8973725 (+)
G222094 NA non-coding downstream 80769 9052133 ~ 9054013 (+)
G222099 NA non-coding downstream 90243 9061607 ~ 9061840 (+)
G222101 NA non-coding downstream 93051 9064415 ~ 9064640 (+)
G221526 LOC106591640 other upstream 62260 8840224 ~ 8908728 (+)
G221539 NA other upstream 107012 8861500 ~ 8863976 (+)
G221525 LOC106605893 other upstream 119425 8847836 ~ 8878616 (+)
LOC110520836 LOC106605888 other upstream 196038 8772336 ~ 8800464 (+)
LOC110520796 fam189b other upstream 207399 8715996 ~ 8766590 (+)
G222089 NA other downstream 63994 9035358 ~ 9035833 (+)
G222102 NA other downstream 95782 9067146 ~ 9068151 (+)
G222287 NA other downstream 473683 9445047 ~ 9445704 (+)
G222345 LOC106594812 other downstream 634941 9606305 ~ 9611139 (+)

Expression


Co-expression Network