G222066


Basic Information

Item Value
gene id G222066
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 8971476 ~ 8972335 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253540
AGGTAGTACAGTACCTgaaatgggccatgctatagaaggtggtacagtacagtacctgaagtgggcaatgctatagaaggtgggacagtacctgaagtgggccatgctaaaGAAGGTAGTACAGTACCTgaaatgggccatgctatagaaggtcgTACAGTACTTGAAATGGGCCATGCTATaaaaggtggtacagtacctgaagtgggccatgctatagaaggtgggacagtacctgaagtggaccATGCTATAGAAGGCggtacagtacctgaaatgggccatgctatagaaggtgggaaagtacctgaagtgggccatactATAGAAAGTGGGATAGTACAGTACCTgaaatgggccatgctatagaaggtggtacagaaccctgaagtgggccatgctataaaaggtggtacagtacctgaaatgggccatgctatagaaggtggtacagtacctgaaatgggccatgctttagaaggtggtacagtacctgaagtgggccatgctatagaaggtggtacagtacctgaagtgggccatgctacagaaggtggtacagtacctgaagtgggccatgctatagaaggtgggacagtacctgaagtgggccatactATAGAAAGtgggacagtacagtacctgaaatgggccatgctatagaaggtggtacagaaccctgaagtgggccatactatagaaggtgggacagtacctaaagtgggccatgctatagaaggtggtacagtacctgaagtgggcaatgctatagaaggtggtacagtaccctGAAGTGGGCCATACTATAGAAGTtgggacagtacctgaagtgggccatgcaaTAGAAGGTGGGACGGTAC

Function

NR:

description
PREDICTED: clumping factor A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253540 True 860 lncRNA 0.48 1 8971476 8972335

Neighbor

gene id symbol gene type direction distance location
LOC100136250 LOC100136250 coding downstream 22297 8938820 ~ 8949179 (-)
LOC110520883 LOC100136250 coding downstream 50418 8912439 ~ 8921058 (-)
LOC110520884 LOC100136250 coding downstream 83823 8878988 ~ 8887653 (-)
LOC110516769 LOC100136250 coding downstream 109245 8853815 ~ 8862231 (-)
LOC110520835 ash1l coding downstream 131797 8804651 ~ 8839679 (-)
LOC110520856 LOC106591015 coding upstream 1621 8973956 ~ 8982283 (-)
LOC110520814 LOC106595728 coding upstream 15749 8988084 ~ 9050862 (-)
LOC110501040 LOC106605812 coding upstream 129090 9101425 ~ 9118437 (-)
LOC110500119 LOC105018975 coding upstream 149887 9122222 ~ 9150991 (-)
LOC110508553 LOC105018974 coding upstream 188648 9160983 ~ 9231958 (-)
G222064 NA non-coding downstream 7493 8963752 ~ 8963983 (-)
G222059 NA non-coding downstream 17798 8953424 ~ 8953678 (-)
G222025 NA non-coding downstream 59166 8852960 ~ 8912310 (-)
G222009 NA non-coding downstream 167810 8803105 ~ 8803666 (-)
G222007 NA non-coding downstream 168457 8801951 ~ 8803019 (-)
G222412 NA non-coding upstream 13309 8985644 ~ 8987837 (-)
G222442 NA non-coding upstream 79059 9051394 ~ 9051608 (-)
G222448 NA non-coding upstream 84607 9056942 ~ 9057573 (-)
G222451 NA non-coding upstream 92225 9064560 ~ 9064848 (-)
G222023 LOC100136250 other downstream 22289 8853817 ~ 8949187 (-)
G221986 NA other downstream 207592 8763119 ~ 8763884 (-)
G221807 adar other downstream 448268 8503184 ~ 8523208 (-)
G221806 NA other downstream 560667 8394361 ~ 8410809 (-)
G222465 NA other upstream 120845 9093180 ~ 9095216 (-)
G222607 LOC106574954 other upstream 522461 9494796 ~ 9496853 (-)
LOC110508584 LOC104949237 other upstream 558839 9528874 ~ 9551643 (-)
LOC110520821 LOC106574299 other upstream 589410 9559133 ~ 9594654 (-)

Expression


Co-expression Network