G222412


Basic Information

Item Value
gene id G222412
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 8985644 ~ 8987837 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253992
GCAAACATTTTATTGATGCAACTTTATGTCCATTgagtttctcccctccctctctctctctccctccctctcacttggTCTTGGTAGAGAAGATGTAGGACTCCAGAAGAAAGACAGTCTCATCCACCTGGTTCTCTGTAGAGTCCAACCTTCAGGGAGAAAGGAAACAAGTAAAAGAAAGAGGTAATAAAGCTACAGTAATGTAGCAGTATTAGTACTTGTTGATGTGATGTCGTAGGCCTCTAGCTGTTGTCTATAGATATATAGTATGGGTGTCGTAGCAgtagcatcctgactggttgcatcactgcctggtaaggcaagtgctcggcctccgaccgtcaggcactacagagggtagtgcgtacggcccagtacatcactggggccaagctttctgccatccaggacctctacaccaggcggtgtcagaggaaggacctaaaaattgtcaaagaccccagccaccccagtcatagactgttctctctactaccgcatggcaagcggcaccggagcaccaagtctaggaccaaaaggcttctcaacagcttttacccccatacgactcctgaacaggtaaacaaatggctacccggactatttgcattgttccACCCCCCCAActtctcttttacgctgctgctactctctgtttatcaataatgcatagtcacttcaaactatacattcatgtacatactacctcaattagcccgactaaccggtgcccccagaCATTGGCTAccaggactatctgcattgtgtcccgccacccaccaacccctcttttacgctactgctactctccgtttatcatatatgcatagtcactttaaccatacctacatgtacatactacctcaatcagcctgactaacctgtgcctgtatatagcctcgctactgctaTTTTTcactctttttactgttgtttttacttATCCATTGTTTACCTAAAAATCACACCgttggtaagtaagcatttcactgtaatacctgttgtattcggcacacgtgacaaataaactttgatttgatttagtagtAGTACTTGTTGATGTGACGTCGTAGGTCTTCTAGTTGgaggtctcaacttactgttgagagttagaatagtagaatacacaagttgTAATTTTGACatgttgtgcatcagcagtttctcttgttatgtcagtcactgacagtcactcagccatgtcagctaacattctGTAGATTGTTAGTCTTATCTAAACTAGCAGTAATCATGGTTGAATTAATCCCTCTCACTCAGATAGCATATTAAAAGCagaaaacatttctctccaccttatggcaaaatgtgtagaattgcaggaaatgtactcTAAAAAGTAAATGTATTGTCTCCTAGCTTAGGGCCCCTAAAAGGGTCGGCTCCGACTGCATGAGTGGGTATGGATGTGGTGCGCAGACCCGCGATGCTCATATTTTTTGTGGCCCCCCcatccccatcaaagttgcccatccctgatctatagtacgtgtgtagtagtagtaatgcaGTATTTGTTGATGTGATGTTGCAGGGCCCCTACCTGCTGTCTCTATAGATCTATAGTATGGATGTAGTAGTAATTAAGATGTAATGGTAATTAAGGTGCCGTGGTAATTAAGGTGCCGTGGTAATTAAGGTGCCGTGGTAATTAAGGCGCCGTGGTAATTAAGGCGCCGTGGTAATTAAGGCGCCGTGGTAATTAAGGTGCCGTGGTAATTAAGGCGCCGTGGTAATTAAGGCGCCGTGGTAATTAAGGCGCAGTGGTAATTAAGGCGCCGTGGTAATTAAGGCGCAGTGGTAATTAAGGTGCCGTGGTAATTAAGGCGCAGTGGTAATTAAGGTGCCGTGGTAATTAAGGCGCAGTGGTAATTAAGGCGCAGTGGTAATGCAGTACTTGTTGATGTGATGTCGCAGGGCTTCTAGCTGCTGTCTCTCGGGGGCAGTGATCATCTCCTCCACCTCTGTCAGCTGTTCAGGCTCCGCCCCACTGGCCTGCAGCGATGCCAGGATCGCCACAATTCGCTGGGACTTCTCCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253992 True 2058 lncRNA 0.46 3 8985644 8987837

Neighbor

gene id symbol gene type direction distance location
LOC110520856 LOC106591015 coding downstream 3361 8973956 ~ 8982283 (-)
LOC100136250 LOC100136250 coding downstream 36465 8938820 ~ 8949179 (-)
LOC110520883 LOC100136250 coding downstream 64586 8912439 ~ 8921058 (-)
LOC110520884 LOC100136250 coding downstream 97991 8878988 ~ 8887653 (-)
LOC110516769 LOC100136250 coding downstream 123413 8853815 ~ 8862231 (-)
LOC110520814 LOC106595728 coding upstream 247 8988084 ~ 9050862 (-)
LOC110501040 LOC106605812 coding upstream 113588 9101425 ~ 9118437 (-)
LOC110500119 LOC105018975 coding upstream 134385 9122222 ~ 9150991 (-)
LOC110508553 LOC105018974 coding upstream 173146 9160983 ~ 9231958 (-)
LOC110508538 LOC106594717 coding upstream 245612 9233449 ~ 9333337 (-)
G222066 NA non-coding downstream 13309 8971476 ~ 8972335 (-)
G222064 NA non-coding downstream 21661 8963752 ~ 8963983 (-)
G222059 NA non-coding downstream 31966 8953424 ~ 8953678 (-)
G222025 NA non-coding downstream 73334 8852960 ~ 8912310 (-)
G222009 NA non-coding downstream 181978 8803105 ~ 8803666 (-)
G222442 NA non-coding upstream 63557 9051394 ~ 9051608 (-)
G222448 NA non-coding upstream 69105 9056942 ~ 9057573 (-)
G222451 NA non-coding upstream 76723 9064560 ~ 9064848 (-)
G222453 NA non-coding upstream 80996 9068833 ~ 9069221 (-)
G222023 LOC100136250 other downstream 36457 8853817 ~ 8949187 (-)
LOC110520835 ash1l other downstream 164577 8804651 ~ 8839679 (-)
G221986 NA other downstream 221760 8763119 ~ 8763884 (-)
G221807 adar other downstream 462436 8503184 ~ 8523208 (-)
G221806 NA other downstream 574835 8394361 ~ 8410809 (-)
G222465 NA other upstream 105343 9093180 ~ 9095216 (-)
G222607 LOC106574954 other upstream 506959 9494796 ~ 9496853 (-)
LOC110508584 LOC104949237 other upstream 543337 9528874 ~ 9551643 (-)
LOC110520821 LOC106574299 other upstream 573908 9559133 ~ 9594654 (-)

Expression


Co-expression Network