G222108


Basic Information

Item Value
gene id G222108
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9072134 ~ 9072541 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253599
CCAGCGCTTTGAGAAGCTCCTCGAAGTTCTCTGAGCTCTTCATCTTCCAGGTACCAGCGAAGTCAGGGATTTTGCGCTCCATGGTTCAGAGTATAGGGTGGCTGGATAGATCAATTTGAATAATTTTTCAAAACGGATTGTTTTACTCTCCAACTCTGCCCTCTTTTCAATCAGTGCGGGGTCTCGAGGTGGTCGGTGGTCCCCTCTCCCTAACCGGTTAAGAGGTGATCTGGATTGGATTTAGACTTTCCGGTCCCGTTAGTTTTGCCCCCTCAGCAGGTTGTGACCGTGTGTCTCTCAACTGTTTGACTGAGGTGGCTGTGAGTGCCctaatccaaccctctctctgtctctctctcgctgatcCCTATCTCGCCTATGCGTCAGTGCACGTTATGAGCGGTTGCG

Function

NR:

description
PREDICTED: cellular retinoic acid-binding protein 2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU253599 True 408 lncRNA 0.51 1 9072134 9072541

Neighbor

gene id symbol gene type direction distance location
LOC110520813 LOC106605815 coding upstream 84288 8982594 ~ 8987846 (+)
LOC110517169 LOC106605893 coding upstream 133436 8932771 ~ 8938698 (+)
LOC118945318 LOC106575331 coding upstream 146077 8898021 ~ 8926057 (+)
LOC110520801 LOC106605893 coding upstream 159824 8906566 ~ 8912310 (+)
LOC110516768 LOC106605893 coding upstream 193481 8865764 ~ 8878653 (+)
LOC110520819 LOC106575022 coding downstream 390796 9463337 ~ 9483086 (+)
LOC118944441 NA coding downstream 413059 9485600 ~ 9486125 (+)
LOC110520820 LOC107573682 coding downstream 417792 9490333 ~ 9508263 (+)
LOC118945352 NA coding downstream 540353 9612894 ~ 9622952 (+)
LOC110536529 LOC106573824 coding downstream 616523 9688881 ~ 9692007 (+)
G222101 NA non-coding upstream 7494 9064415 ~ 9064640 (+)
G222099 NA non-coding upstream 10294 9061607 ~ 9061840 (+)
G222094 NA non-coding upstream 18121 9052133 ~ 9054013 (+)
G222069 NA non-coding upstream 98409 8973096 ~ 8973725 (+)
G222111 NA non-coding downstream 14447 9086988 ~ 9087193 (+)
G222114 NA non-coding downstream 19828 9092369 ~ 9093122 (+)
G222119 NA non-coding downstream 24731 9097272 ~ 9103137 (+)
G222121 arnt non-coding downstream 33476 9106017 ~ 9106234 (+)
G222122 NA non-coding downstream 34299 9106840 ~ 9107133 (+)
G222102 NA other upstream 3983 9067146 ~ 9068151 (+)
G222089 NA other upstream 36301 9035358 ~ 9035833 (+)
G221526 LOC106591640 other upstream 163406 8840224 ~ 8908728 (+)
G221539 NA other upstream 208158 8861500 ~ 8863976 (+)
G221525 LOC106605893 other upstream 220571 8847836 ~ 8878616 (+)
G222287 NA other downstream 372506 9445047 ~ 9445704 (+)
G222345 LOC106594812 other downstream 533764 9606305 ~ 9611139 (+)
G222353 LOC106573525 other downstream 607219 9679760 ~ 9681752 (+)
sphk2 LOC106605743 other downstream 830571 9900809 ~ 9916529 (+)

Expression


Co-expression Network