G222119


Basic Information

Item Value
gene id G222119
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9097272 ~ 9103137 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253615
CAATATAACAATTTAATAGAAAAACCAAACATTTCACTTTCTCTTGTTTAACATTTCATATACATTCCTAtatttgtgtatctgtgtgcgcTATATAAACTGCAGCTCACATCATTGTAAAAACCTGGACAGGGAACAACCAAAGTGGTTTAAAACAATAACAAGACAACACAGTCATCAAACTGCCATTTTCATCGTGTGACTATTGACACATGATGGGTTTACATACAATTCACATGTTTCGGCAAGTCTGTGAATTACGCTCACAGACATGTATACATTATCAGACTTAAAATGAAAGGCCTACACAATAACAATTTTTGTATTTCAGAACCTTAAAATTCACAGCCCTCTGTTGCCCAATCAGAATTCTTAATTCCCTGTATAAGAGTGTTATAGTGACTTACTAAACATCACAATCGATTTCAGAAAACAAATGTTTGATTCAGATCATATTCATGAATGTCAAACTATCTCGATAAGGATGAACTTTGAttgaaaaaaagaagaagaaaaagtgtATTAATTGCCAAACTCACAATCAACATCTACTGCTTAATGGATTATTGGGTCATGTGTTTGGAACATGATTAGGATGACTTGAATTTCAGGCCAAACATCATGGCATGATTCTGTCATATTGAATGAGGAATCTTGTCAGTTCTAAACTGGACCTTTCTGTCCTGAACAAGATGCCCTGGTCAATATACATCAAAAACAACCTATCACGAAGTAGCAATGGAGATGGCTACAAAACAGGAAGAGCCAATCAAAAGGCCAGAAAATAAAAACATCAGTTGAAGAAAATTTCAGTCAATCAAATCATTACTACTTCCTGTGTATTTCCGTATTCAagaacaataatcaagataaaaaCATGTAGGACAACAATAAAGAAtggctttaaaaaaataacatcaTTCCTGCTTGTAAATTATTGCTTTCCAATGTcttttttcattttccttttCCTAGTGTAAGTAGAAAAAAAAGCACACTTGGGAGGGTGATTGAGGAAGAGCGTGAGTGGAGGAAGAGTGTGCTGGGTAACCCTGGGTAACAGAGGAAGGAATACAAACGAGTGAGAAAGGGACCCTGGGATTGCTGTGCATTCAGGTTGAGATCAATAAAGTTATACAAACACCTCCAGTAGACATATAACCGTATATAAACACTTGACTTATATACTGGGTATATGTAGGAATACATCAGGTTGTAGTTTCATATCCCCCTCTTCCCTTTACTAGTCATAGacatctctctcaacctctccccctcactagtcatagacatctctctccctctctccccctcactagtcatagacatctctctccctcactagtcATAGACATCTCTCTCAACCTCAATAGTCATAGacatctctctcaacctctccccctcactagtcatagacatctctctccccctcactagtcatagacatctctctccctctctccctcactagtcatagacatctctctccctctctccccctcactagtcatagacatctctctctccctcactagtcatagaaatctctctccctctctccctcactagtcatagacatctctctccccctcactagtCATtgacatctctctccccctcactagtcatagacctctctctccccctcactagtcatagacatctctctccctcactagtcatagacatctctctccccctcagtagtcatagacatctctctccttctctctccctcactagtcatagacatctctctccctcactagtcatagacatctctctccctcactagtcatagacatctctctccctcactagtcatagacatctctctccctcactagtcatagacatctctctccctcactagtcatagacatctctctccccctcagtagtcatagacatctctctccttctctctccctcactagtcatagacatctctctccccctcagtagtcatagacatctctctccctctctccccctcactagtcatagacatctctctccctcactagtcatagacatctctctccccctcactagtcatagacatctctctccttctctctccctcactagtcatagacatctctctccatctctccctcactagtcatagacatctctctccatctctccctcactagtcatagacatctctctccatctctccctcactagtcatagacatctctctccatctctccctcactagtcatagacatctctctccccctcactagtcatagacatctctctccagctctccctcactagtcatagacatctctctccagctctccctcactagtcatagacatctctccccatctctccctcactagtcatagacatctctctccccctcactagtcatagacatctctctccccctcactagtcatagacatctctctctccctcactagtcatagacatctctctctccctcactagtcatagacatctctctctccctcactagtcatagacatctctctccccctcactagtcatagacatctctctccccctcactagtcatagacatctctctctccctcactagtcatagacatctctctctccctcactagtcatagacatctctctccagctctccctcactagtcatagacatctctccccatctctccctcactagtcatagacatctctctccatctctccctcactagtcatagacatctctctctccctcactagtcatagacatctctctccagctctccctcactagtcatagacatctctccccatctctccctcactagtcatagacatctctccctcttttccaccTGAAACCACCATAACCACATTGTTAGGTGACATCGTCAATGTAGAAATATAAAAGTGTTTGTACAGTGTTGGTATAAATCTGCCTGCGTGAGGACAGTGTCCTTTTGAACATGCTACGGGTCGCTAAGCTAAAACAGCGAGGGGAGCAGATAGAGGATATTCACAGGCTTCAGATCAGAATAttcccatatatatatattcccacaTATTCCCCCAAAGCTGTAGATCACCTGGATTGCCTGAGGCTTCAAGTGAATGATTGGACtgatctatctctctccccctcagtagtcatagacatctctctccttctctctccctcactagtcatagacatctctctccctcactagtcatagacatctctctccctcactagtcatagacatctctctccctcactagtcatagacatctctctccctcactagtcatagacatctctctccctcactagtcatagacatctctctccccctcagtagtcatagacatctctctccttctctctccctcactagtcatagacatctctctccccctcagtagtcatagacatctctctccctctctccccctcactagtcatagacatctctctccctcactagtcatagacatctctctccccctcactagtcatagacatctctctccttctctctccctcactagtcatagacatctctctccatctctccctcactagtcatagacatctctctccatctctccctcactagtcatagacatctctctccatctctccctcactagtcatagacatctctctccatctctccctcactagtcatagacatctctctccccctcactagtcatagacatctctctccagctctccctcactagtcatagacatctctctccagctctccctcactagtcatagacatctctccccatctctccctcactagtcatagacatctctctccccctcactagtcatagacatctctctccccctcactagtcatagacatctctctctccctcactagtcatagacatctctctctccctcactagtcatagacatctctctctccctcactagtcatagacatctctctccccctcactagtcatagacatctctctccccctcactagtcatagacatctctctctccctcactagtcatagacatctctctctccctcactagtcatagacatctctctccagctctccctcactagtcatagacatctctccccatctctccctcactagtcatagacatctctctccatctctccctcactagtcatagacatctctctctccctcactagtcatagacatctctctccagctctccctcactagtcatagacatctctccccatctctccctcactagtcatagacatctctccctcttttccaccTGAAACCACCATAACCACATTGTTAGGTGACATCGTCAATGTAGAAATATAAAAGTGTTTGTACAGTGTTGGTATAAATCTGCCTGCGTGAGGACAGTGTCCTTTTGAACATGCTACGGGTCGCTAAGCTAAAACAGCGAGGGGAGCAGATAGAGGATATTCACAGGCTTCAGATCAGAATAttcccatatatatatattcccacaTATTCCCCCAAAGCTGTAGATCACCTGGATTGCCTGAGGCTTCAAGTGAATGATTGGACTGATCTATCCATATGATGTACAGACCAGTGGAGCAGCATAGATCTAAACACACAGCTGACTCGGTTAGTGAAAGGCCATGTTTGTGTGTTACTGGTGAAGCAGTGCCTGCCTCAGGGCCTTGTGCATGCTCAGGTGGGATTGTGTGTTACATCTCTACAACAAATCCACTGGCTGTGGAGCTTGGGCAGTGCTAGCTACAGATGTCATTTTACATTTGCACAACTATCGCTGAACCCtgaatctcttctctctctctccccctttcacgTGCTTATTGAACCTGCATTTGCATACCTAAACTTgatttcactctctcttttccctgATTAACTCGCTTTCTCCATCCTGGCAGTGCAATCATCTGAGCGATAATTAGACATGCTCTCTTTGGATCACGACAGGCAAAGAAAGAGAGCAAAGTGCACcaaatgagagagaaggagacatttgagagacagaggaggtaAGTGGAAGAGTGTATGTGAGGTCACTCGTTGAAAGAGGGGTAGATGGGAATCTCAAAGTCATCGTTGTTGAAGTTGGCTGGCTGGTCCAGCATGGCGAGaaca
>TU253616
CAATATAACAATTTAATAGAAAAACCAAACATTTCACTTTCTCTTGTTTAACATTTCATATACATTCCTAtatttgtgtatctgtgtgcgcTATATAAACTGCAGCTCACATCATTGTAAAAACCTGGACAGGGAACAACCAAAGTGGTTTAAAACAATAACAAGACAACACAGTCATCAAACTGCCATTTTCATCGTGTGACTATTGACACATGATGGGTTTACATACAATTCACATGTTTCGGCAAGTCTGTGAATTACGCTCACAGACATGTATACATTATCAGACTTAAAATGAAAGGCCTACACAATAACAATTTTTGTATTTCAGAACCTTAAAATTCACAGCCCTCTGTTGCCCAATCAGAATTCTTAATTCCCTGTATAAGAGTGTTATAGTGACTTACTAAACATCACAATCGATTTCAGAAAACAAATGTTTGATTCAGATCATATTCATGAATGTCAAACTATCTCGATAAGGATGAACTTTGAttgaaaaaaagaagaagaaaaagtgtATTAATTGCCAAACTCACAATCAACATCTACTGCTTAATGGATTATTGGGTCATGTGTTTGGAACATGATTAGGATGACTTGAATTTCAGGCCAAACATCATGGCATGATTCTGTCATATTGAATGAGGAATCTTGTCAGTTCTAAACTGGACCTTTCTGTCCTGAACAAGATGCCCTGGTCAATATACATCAAAAACAACCTATCACGAAGTAGCAATGGAGATGGCTACAAAACAGGAAGAGCCAATCAAAAGGCCAGAAAATAAAAACATCAGTTGAAGAAAATTTCAGTCAATCAAATCATTACTACTTCCTGTGTATTTCCGTATTCAagaacaataatcaagataaaaaCATGTAGGACAACAATAAAGAAtggctttaaaaaaataacatcaTTCCTGCTTGTAAATTATTGCTTTCCAATGTcttttttcattttccttttCCTAGTGTAAGTAGAAAAAAAAGCACACTTGGGAGGGTGATTGAGGAAGAGCGTGAGTGGAGGAAGAGTGTGCTGGGTAACCCTGGGTAACAGAGGAAGGAATACAAACGAGTGAGAAAGGGACCCTGGGATTGCTGTGCATTCAGGTTGAGATCAATAAAGTTATACAAACACCTCCAGTAGACATATAACCGTATATAAACACTTGACTTATATACTGGGTATATGTAGGAATACATCAGGTTGTAGTTTCATATCCCCCTCTTCCCTTTACTAGTCATAGacatctctctcaacctctccccctcactagtcatagacatctctctccctctctccccctcactagtcatagacatctctctccctcactagtcATAGACATCTCTCTccctcactagtcatagacctctctctccccctcactagtcatagacatctctctccctcactagtcatagacatctctctccccctcagtagtcatagacatct
>TU253618
CAATATAACAATTTAATAGAAAAACCAAACATTTCACTTTCTCTTGTTTAACATTTCATATACATTCCTAtatttgtgtatctgtgtgcgcTATATAAACTGCAGCTCACATCATTGTAAAAACCTGGACAGGGAACAACCAAAGTGGTTTAAAACAATAACAAGACAACACAGTCATCAAACTGCCATTTTCATCGTGTGACTATTGACACATGATGGGTTTACATACAATTCACATGTTTCGGCAAGTCTGTGAATTACGCTCACAGACATGTATACATTATCAGACTTAAAATGAAAGGCCTACACAATAACAATTTTTGTATTTCAGAACCTTAAAATTCACAGCCCTCTGTTGCCCAATCAGAATTCTTAATTCCCTGTATAAGAGTGTTATAGTGACTTACTAAACATCACAATCGATTTCAGAAAACAAATGTTTGATTCAGATCATATTCATGAATGTCAAACTATCTCGATAAGGATGAACTTTGAttgaaaaaaagaagaagaaaaagtgtATTAATTGCCAAACTCACAATCAACATCTACTGCTTAATGGATTATTGGGTCATGTGTTTGGAACATGATTAGGATGACTTGAATTTCAGGCCAAACATCATGGCATGATTCTGTCATATTGAATGAGGAATCTTGTCAGTTCTAAACTGGACCTTTCTGTCCTGAACAAGATGCCCTGGTCAATATACATCAAAAACAACCTATCACGAAGTAGCAATGGAGATGGCTACAAAACAGGAAGAGCCAATCAAAAGGCCAGAAAATAAAAACATCAGTTGAAGAAAATTTCAGTCAATCAAATCATTACTACTTCCTGTGTATTTCCGTATTCAagaacaataatcaagataaaaaCATGTAGGACAACAATAAAGAAtggctttaaaaaaataacatcaTTCCTGCTTGTAAATTATTGCTTTCCAATGTcttttttcattttccttttCCTAGTGTAAGTAGAAAAAAAAGCACACTTGGGAGGGTGATTGAGGAAGAGCGTGAGTGGAGGAAGAGTGTGCTGGGTAACCCTGGGTAACAGAGGAAGGAATACAAACGAGTGAGAAAGGGACCCTGGGATTGCTGTGCATTCAGGTTGAGATCAATAAAGTTATACAAACACCTCCAGTAGACATATAACCGTATATAAACACTTGACTTATATACTGGGTATATGTAGGAATACATCAGGTTGTAGTTTCATATCCCCCTCTTCCCTTTACTAGTCATAGacatctctctcaacctctccccctcactagtcatagacatctctctccctctctccccctcactagtcatagacatctctctccctcactagtcATAGACATCTCTCTCAACCTCAATAGTCATAGacatctctctcaacctctccccctcactagtcatagacatctctctccccctcactagtcatagacatctctctccctctctccctcactagtcatagacatctctctccctctctccccctcactagtcatagacatctctctctccctcactagtcatagaaatctctctccctctctccctcactagtcatagacatctctctccccctcactagtCATtgacatctctctccccctcactagtcatagacctctctctccccctcactagtcatagacatctctctccctcactagtcatagacatctctctccccctcactagtcatagacatctctctccttctctctccctcactagtcatagacatctctctccatctctccctcactagtcatagacatctctctccatctctccctcactagtcatagacatctctctccatctctccctcactagtcatagacatctctctccatctctccctcactagtcatagacatctctctccccctcactagtcatagacatctctccccatctctccctcactagtcatagacatctctccctcttttccaccTGAAACCACCATAACCACATTGTTAGGTGACATCGTCAATGTAGAAATATAAAAGTGTTTGTACAGTGTTGGTATAAATCTGCCTGCGTGAGGACAGTGTCCTTTTGAACATGCTACGGGTCGCTAAGCTAAAACAGCGAGGGGAGCAGATAGAGGATATTCACAGGCTTCAGATCAGAATAttcccatatatatatattcccacaTATTCCCCCAAAGCTGTAGATCACCTGGATTGCCTGAGGCTTCAAGTGAATGATTGGACTGATCTATCCATATGATGTACAGACCAGTGGAGCAGCATAGATCTAAACACACAGCTGACTCGGTTAGTGAAAGGCCATGTTTGTGTGTTACTGGTGAAGCAGTGCCTGCCTCAGGGCCTTGTGCATGCTCAGGTGGGATTGTGTGTTACATCTCTACAACAAATCCACTGGCTGTGGAGCTTGGGCAGTGCTAGCTACAGATGTCATTTTACATTTGCACAACTATCGCTGAACCCtgaatctcttctctctctctccccctttcacgTGCTTATTGAACCTGCATTTGCATACCTAAACTTgatttcactctctcttttccctgATTAACTCGCTTTCTCCATCCTGGCAGTGCAATCATCTGAGCGATAATTAGACATGCTCTCTTTGGATCACGACAGGCAAAGAAAGAGAGCAAAGTGCACcaaatgagagagaaggagacatttgagagacagaggaggtaAGTGGAAGAGTGTATGTGAGGTCACTCGTTGAAAGAGGGGTAGATGGGAATCTCAAAGTCATCGTTGTTGAAGTTGGCTGGCTGGTCCAGCATGGCGAGaacatcctagagagagagaaagatttaaCTTGAAAGCAACATGACAACACATAACAAAAGACACAGATGGAGACATGGGGAAGGGAAAGGCAGATTGATataggtagagggagagagacttacAGGGAAGATGTCAGGCTGGTTGTTCTGTGTGTGGGGGTGCtgctctgccctgttctgagcttGCTGCTGGCCCTGCCACTGGGGCCACACTGCCTCCACTGCCCTGGAGGGGAACTGCTGCCCCGACCCCAAGCCATCTATCAGAGACAATGGGCGATTCAGTATCTAACTACACcagcatacacaaacacataaaaACACTACTgtagttgacacacacacacactctctcagggTCACGTACCATATCCGTTGGAATTGAGGCTGGCGCGGGGGTTGATATTTGGGTAGTTAGCCCCCATGGTGGGGGTCGGAGCAGCAGTGGTGGGCATCGCCCCAAATGAGGAGGAAGAGCCCCCAACAAAACTTCCCATGGCAAACTGGGGAGACAGGGCCTTCCCTGCCTGGGGCACCACCTGCTGGGCGGGAGGTGAACAACACCATGTTATTATTCACACTTTGTTGAAACTGTCTGGGTGTGATACTCAAAACACAGGTTACACAGGAATAACAGACGAGGTCCTTTACAACGCTAAGATACAGAGATGCAAGAACCTCAGAGCACTCATCCCCATCACAccagctacagatgtaggatttcaATTTGATAACCCTGTTCAAGGAAAACTG

Function

NR:

description
aryl hydrocarbon receptor nuclear translocator protein isoform a

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253615 False 5089 lncRNA 0.51 2 9097272 9102388
TU253616 False 1465 lncRNA 0.39 2 9097272 9099018
TU253618 True 3553 lncRNA 0.44 4 9097272 9103137

Neighbor

gene id symbol gene type direction distance location
LOC110520813 LOC106605815 coding upstream 109426 8982594 ~ 8987846 (+)
LOC110517169 LOC106605893 coding upstream 158574 8932771 ~ 8938698 (+)
LOC118945318 LOC106575331 coding upstream 171215 8898021 ~ 8926057 (+)
LOC110520801 LOC106605893 coding upstream 184962 8906566 ~ 8912310 (+)
LOC110516768 LOC106605893 coding upstream 218619 8865764 ~ 8878653 (+)
LOC110520819 LOC106575022 coding downstream 360200 9463337 ~ 9483086 (+)
LOC118944441 NA coding downstream 382463 9485600 ~ 9486125 (+)
LOC110520820 LOC107573682 coding downstream 387196 9490333 ~ 9508263 (+)
LOC118945352 NA coding downstream 509757 9612894 ~ 9622952 (+)
LOC110536529 LOC106573824 coding downstream 585927 9688881 ~ 9692007 (+)
G222114 NA non-coding upstream 4150 9092369 ~ 9093122 (+)
G222111 NA non-coding upstream 10079 9086988 ~ 9087193 (+)
G222108 NA non-coding upstream 24731 9072134 ~ 9072541 (+)
G222101 NA non-coding upstream 32632 9064415 ~ 9064640 (+)
G222099 NA non-coding upstream 35432 9061607 ~ 9061840 (+)
G222121 arnt non-coding downstream 2880 9106017 ~ 9106234 (+)
G222122 NA non-coding downstream 3703 9106840 ~ 9107133 (+)
G222123 NA non-coding downstream 4365 9107502 ~ 9107702 (+)
G222128 LOC105018976 non-coding downstream 12701 9115838 ~ 9165250 (+)
G222104 NA non-coding downstream 15708 9118845 ~ 9121340 (+)
G222102 NA other upstream 29121 9067146 ~ 9068151 (+)
G222089 NA other upstream 61439 9035358 ~ 9035833 (+)
G221526 LOC106591640 other upstream 188544 8840224 ~ 8908728 (+)
G222287 NA other downstream 341910 9445047 ~ 9445704 (+)
G222345 LOC106594812 other downstream 503168 9606305 ~ 9611139 (+)
G222353 LOC106573525 other downstream 576623 9679760 ~ 9681752 (+)
sphk2 LOC106605743 other downstream 799975 9900809 ~ 9916529 (+)

Expression


Co-expression Network