G222425


Basic Information

Item Value
gene id G222425
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9097963 ~ 9098998 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254024
ggggagagagatgtctatgactagtgagggagagagatgtctatgactagtgagggggagagagatgtcaATGactagtgagggggagagagatgtctatgactagtgagggagagagggagagagatttctatgactagtgagggagagagagatgtctatgactagtgagggggagagagatgtctatgactagtgagggggagagagggagagagatgtctatgactagtgagggagagagggagagagatgtctatgactagtgagggggagagagatgtctatgactagtgagggggagaggttgagagagatgtCTATGACTAGTAAAGGGAAGAGGGGGATATGAAACTACAACCTGATGTATTCCTACATATACCCAGTATATAAGTCAAGTGTTTATATACGGTTATATGTCTACTGGAGGTGTTTGTATAACTTTATTGATCTCAACCTGAATGCACAGCAATCCCAGGGTCCCTTTCTCACTCGTTTGTATTCCTTCCTCTGTTACCCAGGGTTACCCAGCACACTCTTCCTCCACTCACGCTCTTCCTCAATCACCCTCCCAAGTGTGCTTTTTTTTCTACTTACACTAGGaaaaggaaaatgaaaaaagACATTGGAAAGCAATAATTTACAAGCAGGAAtgatgttatttttttaaagccaTTCTTTATTGTTGTCCTACATGtttttatcttgattattgttctTGAATACGGAAATACACAGGAAGTAGTAATGATTTGATTGACTGAAATTTTCTTCAACTGATGTTTTTATTTTCTGGCCTTTTGATTGGCTCTTCCTGTTTTGTAGCCATCTCCATTGCTACTTCGTGATAGGTTGTTTTTGATGTATATTGACCAGGGCATC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU254024 True 882 lncRNA 0.42 3 9097963 9098998

Neighbor

gene id symbol gene type direction distance location
LOC110520814 LOC106595728 coding downstream 47101 8988084 ~ 9050862 (-)
LOC110520856 LOC106591015 coding downstream 115680 8973956 ~ 8982283 (-)
LOC100136250 LOC100136250 coding downstream 148784 8938820 ~ 8949179 (-)
LOC110520883 LOC100136250 coding downstream 176905 8912439 ~ 8921058 (-)
LOC110520884 LOC100136250 coding downstream 210310 8878988 ~ 8887653 (-)
LOC110501040 LOC106605812 coding upstream 2427 9101425 ~ 9118437 (-)
LOC110500119 LOC105018975 coding upstream 23224 9122222 ~ 9150991 (-)
LOC110508553 LOC105018974 coding upstream 61985 9160983 ~ 9231958 (-)
LOC110508538 LOC106594717 coding upstream 134451 9233449 ~ 9333337 (-)
LOC118945333 NA coding upstream 220648 9319354 ~ 9389195 (-)
G222464 NA non-coding downstream 4841 9092358 ~ 9093122 (-)
G222455 NA non-coding downstream 24137 9073608 ~ 9073826 (-)
G222435 NA non-coding downstream 25345 9071936 ~ 9072618 (-)
G222453 NA non-coding downstream 28742 9068833 ~ 9069221 (-)
G222451 NA non-coding downstream 33115 9064560 ~ 9064848 (-)
G222467 NA non-coding upstream 8512 9107510 ~ 9107836 (-)
G222423 NA non-coding upstream 19842 9118840 ~ 9121329 (-)
G222437 NA non-coding upstream 63161 9162159 ~ 9163737 (-)
G222482 NA non-coding upstream 77878 9176876 ~ 9219368 (-)
G222498 NA non-coding upstream 128243 9227241 ~ 9227503 (-)
G222465 NA other downstream 2747 9093180 ~ 9095216 (-)
G222023 LOC100136250 other downstream 148776 8853817 ~ 8949187 (-)
LOC110520835 ash1l other downstream 276896 8804651 ~ 8839679 (-)
G221986 NA other downstream 334079 8763119 ~ 8763884 (-)
G221807 adar other downstream 574755 8503184 ~ 8523208 (-)
G222607 LOC106574954 other upstream 395798 9494796 ~ 9496853 (-)
LOC110508584 LOC104949237 other upstream 432176 9528874 ~ 9551643 (-)
LOC110520821 LOC106574299 other upstream 462747 9559133 ~ 9594654 (-)
G222662 NA other upstream 518627 9617625 ~ 9622934 (-)

Expression


Co-expression Network