G222103


Basic Information

Item Value
gene id G222103
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9121787 ~ 9122493 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253589
ATATCTGATAAAAAACTAATAATAATTATGCAATAGATACGTATAGATCCTAATCTGTTATTCAAGAGGACATTTTGTGAAAAATTACTAAATGTATATTTTAATTACAGTTTCGTGAgaattacctgtgtgtgtgtgtgtgtgtgtgtgttattaatgGACTATAATAACAGGTCCATGCCAATTAATGTAGTATATCCaaaattgtgtgtgtgattgagtgttTATAATGTAGTACAGTGTATCTAACCACAGGTACAGGTCTACCTGTAGTTCTCAGGCTTTAGGAATGCCTTTCCTTCTCCTTCGTCCATTTTCCCTACCACTCTGTTCCTTtccatctctcccgttccccttccctccctttccccttccctccatctctcccactctGCTGAGTGAGGGATGTGAATTCTTCACACTCTTACTTCCTGGCACACGTTTTCATTACTCCGTCTTGCGGTGGTTGTTGTGAGCGGCGTGACCATTCTGCACCGCACCTTtcttctccaccccctcctcttcctcccctgacTCGTCTGTCTCTTCTTTATCGCTCCTCTCGTCCTCCACCTTTTCCTGAAGCgaaatgagagaaagaaagagaggtgtGTTCAGAAACAGGTCATC
>TU253590
ATATCTGATAAAAAACTAATAATAATTATGCAATAGATACGTATAGATCCTAATCTGTTATTCAAGAGGACATTTTGTGAAAAATTACTAAATGTATATTTTAATTACAGTTTCGTGAgaattacctgtgtgtgtgtgtgtgtgtgtgtgttattaatgGACTATAATAACAGGTCCATGCCAATTAATGTAGTATATCCaaaattgtgtgtgtgattgagtgttTATAATGTAGTACAGTGTATCTAACCACAGGTACAGGTCTACCTGTAGTTCTCAGGCTTTAGGAATGCCTTTCCTTCTCCTTCGTCCATTTTCCCTACCACTCTGTTCCTTTCCtcttctttccatctctccttttccccttccctcccttccctccatctttccccttccctccctccctccctttccccttccctccatctctcccactctGCTGAGTGAGGGATGTGAATTCTTCACACTCTTACTTCCTGGCACACGTTTTCATTACTCCGTCTTGCGGTGGTTGTTGTGAGCGGCGTGACCATTCTGCACCGCACCTTtcttctccaccccctcctcttcctcccctgacTCGTCTGTCTCTTCTTTATCGCTCCTCTCGTCCTCCACCTTTTCCTGAAGCgaaatgagagaaagaaagagaggtgtGTTCAGAAACAGGTCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253589 False 630 lncRNA 0.39 2 9121787 9122493
TU253590 True 675 lncRNA 0.36 2 9121787 9122493

Neighbor

gene id symbol gene type direction distance location
LOC110520813 LOC106605815 coding upstream 133941 8982594 ~ 8987846 (+)
LOC110517169 LOC106605893 coding upstream 183089 8932771 ~ 8938698 (+)
LOC118945318 LOC106575331 coding upstream 195730 8898021 ~ 8926057 (+)
LOC110520801 LOC106605893 coding upstream 209477 8906566 ~ 8912310 (+)
LOC110516768 LOC106605893 coding upstream 243134 8865764 ~ 8878653 (+)
LOC110520819 LOC106575022 coding downstream 340844 9463337 ~ 9483086 (+)
LOC118944441 NA coding downstream 363107 9485600 ~ 9486125 (+)
LOC110520820 LOC107573682 coding downstream 367840 9490333 ~ 9508263 (+)
LOC118945352 NA coding downstream 490401 9612894 ~ 9622952 (+)
LOC110536529 LOC106573824 coding downstream 566571 9688881 ~ 9692007 (+)
G222104 NA non-coding upstream 447 9118845 ~ 9121340 (+)
G222123 NA non-coding upstream 14085 9107502 ~ 9107702 (+)
G222122 NA non-coding upstream 14654 9106840 ~ 9107133 (+)
G222121 arnt non-coding upstream 15553 9106017 ~ 9106234 (+)
G222119 NA non-coding upstream 18650 9097272 ~ 9103137 (+)
G222107 NA non-coding downstream 720 9123213 ~ 9124886 (+)
G222182 NA non-coding downstream 115893 9238386 ~ 9238784 (+)
G222194 NA non-coding downstream 130365 9252858 ~ 9265713 (+)
G222202 NA non-coding downstream 160665 9283158 ~ 9283409 (+)
G222204 NA non-coding downstream 162970 9285463 ~ 9286105 (+)
G222102 NA other upstream 53636 9067146 ~ 9068151 (+)
G222089 NA other upstream 85954 9035358 ~ 9035833 (+)
G221526 LOC106591640 other upstream 213059 8840224 ~ 8908728 (+)
G222287 NA other downstream 322554 9445047 ~ 9445704 (+)
G222345 LOC106594812 other downstream 483812 9606305 ~ 9611139 (+)
G222353 LOC106573525 other downstream 557267 9679760 ~ 9681752 (+)
sphk2 LOC106605743 other downstream 780619 9900809 ~ 9916529 (+)

Expression


Co-expression Network