G222437


Basic Information

Item Value
gene id G222437
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9162159 ~ 9163737 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254042
tggataTAGAGGTGGGTAACCCCTTTGTAAGGAAAATGTGTGAAATTATTTCGCATGTGTAAGCTAAGCAAGGAATTGTAAATAACTCCCGATAAACAGCACACATTCCTAGGATAAGTCCAAGTCCATCTCATAGTTTAAAGAGCCTTCATCACCCGGTCGcatttccttcatctgcactgaaaCCAAGTAATAGGTGAAAACAATACGGTGGAAGATGAGCAGATGAGcgtagagaggaaagagacagggagggagaggaagttactTCAGACTATTCAGATGCAGCACTGGACTGTGGACCTCTGATGACACTAAACTCTGCTGATCTGGATTCTGATTGGTAGGCTGTGTGTCCTTGGCTTCTGATTGGTAAGATTGTGGACTGGCCTGACTTTCTGATTGGTGTCTATTTCCCCTTCTTTTCTACCAGTCTATTTCCCTCTCCTGTTTTATATCTCTCTAtcactcctctccttttctcccctcccatctttctttctccttctttctctctcttgcttcctttctctctccccttctctcacccCCCTGGCCGGTGTCTTGAGGTAATGGTTTGTGGTTGTTATGGTGTTAAACATTGCCTCTTGTCGATTGGAGAACAGACTTAAACTATAGGAATTCTGGGAGAATTAATAACATGGGGGAAAAATTGTGTCTTGGTATGGGTAGAGGTTACCCATAGAgccagatctaggatcagctaacCTGCCCCAAATCAAAACGTTAACCATATGGGAgaaaacacaaaactgaccttagatcagtttATCTGAATAATCTAATAATAAATAACATTAAAAGACAACAAATGAGAAAAATGTATTGTAATTGCTTTAATTTACAAATTTACCAGAGAAGCTACCACACAGAATTCTAAGCTACTTGTGGACTAAGGGAGACTGTTACCCAGAATTTCTATACTGCAACTGCCAGAGAGTGATGCATGTTGGGAACCTTTGCTTGCCGTGATCTAAGACACAAGTACAACGTGTGcgtgcacggacacacacacacacaaacacacagacatacatacaattacagaaaaggcaaaaggcctcccaAATGACGACAACAACATTCATGGATATTTCACTGTGTTGAGTTGCATGCCCTGGACGCTCTGTATGTCTATGTGTAAAAGCACCATGACGTTATCCCTGTTGAAAAACACAGAGGTTTACTATAGTAACCAATGATGCAGACTTAGTAGAGGTAAACTGTTTTGTGCAAATGGTTTCTggtaatatatttttttgttggaaATGTCATCCACATGAGGGATGAATTGTTTCTATACTGTTATTCCTTTGTTCTCTGATATATAGAGGATTATAGTAGAGGTTAACCACAATACTATATCCATGTCCtaacaagctctctctctctctctctctctctctctctctctctctctctctctctctgttctctctctctctctctctctgttctctctctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254042 True 1494 lncRNA 0.41 2 9162159 9163737

Neighbor

gene id symbol gene type direction distance location
LOC110500119 LOC105018975 coding downstream 11168 9122222 ~ 9150991 (-)
LOC110501040 LOC106605812 coding downstream 43722 9101425 ~ 9118437 (-)
LOC110520814 LOC106595728 coding downstream 111297 8988084 ~ 9050862 (-)
LOC110520856 LOC106591015 coding downstream 179876 8973956 ~ 8982283 (-)
LOC100136250 LOC100136250 coding downstream 212980 8938820 ~ 8949179 (-)
LOC110508538 LOC106594717 coding upstream 69712 9233449 ~ 9333337 (-)
LOC118945333 NA coding upstream 155909 9319354 ~ 9389195 (-)
LOC110520816 LOC100380759 coding upstream 183414 9347151 ~ 9371934 (-)
rprd2b LOC106605802 coding upstream 212762 9376499 ~ 9390272 (-)
LOC110508575 prpf3 coding upstream 226550 9390287 ~ 9401122 (-)
G222423 NA non-coding downstream 40830 9118840 ~ 9121329 (-)
G222467 NA non-coding downstream 54323 9107510 ~ 9107836 (-)
G222425 NA non-coding downstream 63161 9097963 ~ 9098998 (-)
G222464 NA non-coding downstream 69037 9092358 ~ 9093122 (-)
G222455 NA non-coding downstream 88333 9073608 ~ 9073826 (-)
G222482 NA non-coding upstream 13139 9176876 ~ 9219368 (-)
G222498 NA non-coding upstream 63504 9227241 ~ 9227503 (-)
G222500 NA non-coding upstream 65707 9229444 ~ 9230327 (-)
G222517 NA non-coding upstream 82316 9246053 ~ 9247523 (-)
G222518 NA non-coding upstream 88984 9252721 ~ 9253005 (-)
G222465 NA other downstream 66943 9093180 ~ 9095216 (-)
G222023 LOC100136250 other downstream 212972 8853817 ~ 8949187 (-)
LOC110520835 ash1l other downstream 341092 8804651 ~ 8839679 (-)
G221986 NA other downstream 398275 8763119 ~ 8763884 (-)
G222607 LOC106574954 other upstream 331059 9494796 ~ 9496853 (-)
LOC110508584 LOC104949237 other upstream 367437 9528874 ~ 9551643 (-)
LOC110520821 LOC106574299 other upstream 398008 9559133 ~ 9594654 (-)
G222662 NA other upstream 453888 9617625 ~ 9622934 (-)
LOC118944443 LOC106573533 other upstream 508706 9665862 ~ 9673439 (-)

Expression


Co-expression Network