G222517


Basic Information

Item Value
gene id G222517
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9246053 ~ 9247523 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254134
cctggataggtgcgcgctcacggctcactcaaatagaccccgccacagatcacagattaactgatttaccatggcaactagagccgcgtacttttccccgtcggaagcacaaatcctcatggaggcatacgaggaggtaaaagatataattaagaagaaaggcaacaccgccaatgtgataaagcaaagagaaaaagcgtggcaaagtattgcagaccgcctgaatgccaggtcaaaatcaaatacaagaacattctgcagaatggtatggtccctgactaatatttaacaaagcacaagcatatattGTGGGGCCTTCAccagccatggactgggacaatccggcaatcttccctgatgacgacagtggtcggctgctgagggaccaatatgtgttgaattattttagttagtatgtgtgctttcaattttggttaaatatgtcctgcggtggcagaggaatttgggtttttttgggttcgttttttgacgaatttggcctcttatgatgtttgtgcggtatactgtgtgtaatacaaggctgcagggaggctactgcatccattcatttgtctgttcagttgatgtgtatggatttgtcctgcatttattttagtgtgcagacatgcagggtgtgttatatacagacctttgaatgtgtatgtatcattttgtataatatgcttggattctgtgctttccatcttgtagagtcactgtgacttcagtttcgaaaggagctgatggtttacctgctttgttttgtccttattcaataaaggaacataatgttacacattgtgtttttatattcatatggaatgtgtatttgtttatatgacagagtactagggccacactgaagaaaaaggataaagtcataaatttatgaggctggttctttctgcagaaaagctacatattgttcttacagttttgatacttatgacaatgtgatacttaatattctggcacatcagcatgtctttgtttatgaaaccatactgaagtacaatttcacgaaatgccccacacctgtcattttaacaactgtcctcctttaaaacaactggttacaatattatgact

Function

NR:

description
PREDICTED: uncharacterized protein LOC109103436

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254134 True 1089 lncRNA 0.40 2 9246053 9247523

Neighbor

gene id symbol gene type direction distance location
LOC110508553 LOC105018974 coding downstream 14095 9160983 ~ 9231958 (-)
LOC110500119 LOC105018975 coding downstream 95062 9122222 ~ 9150991 (-)
LOC110501040 LOC106605812 coding downstream 127616 9101425 ~ 9118437 (-)
LOC110520814 LOC106595728 coding downstream 195191 8988084 ~ 9050862 (-)
LOC110520856 LOC106591015 coding downstream 263770 8973956 ~ 8982283 (-)
LOC118945333 NA coding upstream 72123 9319354 ~ 9389195 (-)
LOC110520816 LOC100380759 coding upstream 99628 9347151 ~ 9371934 (-)
rprd2b LOC106605802 coding upstream 128976 9376499 ~ 9390272 (-)
LOC110508575 prpf3 coding upstream 142764 9390287 ~ 9401122 (-)
LOC110508582 LOC106575046 coding upstream 198741 9446264 ~ 9451249 (-)
G222500 NA non-coding downstream 15726 9229444 ~ 9230327 (-)
G222498 NA non-coding downstream 18550 9227241 ~ 9227503 (-)
G222482 NA non-coding downstream 26685 9176876 ~ 9219368 (-)
G222437 NA non-coding downstream 82316 9162159 ~ 9163737 (-)
G222423 NA non-coding downstream 124724 9118840 ~ 9121329 (-)
G222518 NA non-coding upstream 5198 9252721 ~ 9253005 (-)
G222519 NA non-coding upstream 6878 9254401 ~ 9254901 (-)
G222522 NA non-coding upstream 27682 9275205 ~ 9277305 (-)
G222529 NA non-coding upstream 46066 9293589 ~ 9293829 (-)
G222532 NA non-coding upstream 52328 9299851 ~ 9300060 (-)
G222465 NA other downstream 150837 9093180 ~ 9095216 (-)
G222023 LOC100136250 other downstream 296866 8853817 ~ 8949187 (-)
LOC110520835 ash1l other downstream 424986 8804651 ~ 8839679 (-)
G221986 NA other downstream 482169 8763119 ~ 8763884 (-)
G222607 LOC106574954 other upstream 247273 9494796 ~ 9496853 (-)
LOC110508584 LOC104949237 other upstream 283651 9528874 ~ 9551643 (-)
LOC110520821 LOC106574299 other upstream 314222 9559133 ~ 9594654 (-)
G222662 NA other upstream 370102 9617625 ~ 9622934 (-)
LOC118944443 LOC106573533 other upstream 424920 9665862 ~ 9673439 (-)

Expression


Co-expression Network