G222202


Basic Information

Item Value
gene id G222202
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9283158 ~ 9283409 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253708
aggcttcgcgccatggatcatcactggaggcttcgtgccatggattattcctggaggcttcgtgccatggatcatcactggaggcttcgtgccatggatcatcactggaggcttcgtgccatggatcatcactggaggcttcgtgccatggatcatcactggaggcttcgtgcaatggatcatcactgcaggcttcgtgccatggatcatcactggaggcttcgtgccatggatcatcactgcaggcttcgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253708 True 252 lncRNA 0.44 1 9283158 9283409

Neighbor

gene id symbol gene type direction distance location
LOC110520813 LOC106605815 coding upstream 295312 8982594 ~ 8987846 (+)
LOC110517169 LOC106605893 coding upstream 344460 8932771 ~ 8938698 (+)
LOC118945318 LOC106575331 coding upstream 357101 8898021 ~ 8926057 (+)
LOC110520801 LOC106605893 coding upstream 370848 8906566 ~ 8912310 (+)
LOC110516768 LOC106605893 coding upstream 404505 8865764 ~ 8878653 (+)
LOC110520819 LOC106575022 coding downstream 179928 9463337 ~ 9483086 (+)
LOC118944441 NA coding downstream 202191 9485600 ~ 9486125 (+)
LOC110520820 LOC107573682 coding downstream 206924 9490333 ~ 9508263 (+)
LOC118945352 NA coding downstream 329485 9612894 ~ 9622952 (+)
LOC110536529 LOC106573824 coding downstream 405655 9688881 ~ 9692007 (+)
G222194 NA non-coding upstream 17445 9252858 ~ 9265713 (+)
G222182 NA non-coding upstream 44374 9238386 ~ 9238784 (+)
G222128 LOC105018976 non-coding upstream 117908 9115838 ~ 9165250 (+)
G222204 NA non-coding downstream 2054 9285463 ~ 9286105 (+)
G222208 NA non-coding downstream 10232 9293641 ~ 9293907 (+)
G222209 NA non-coding downstream 12768 9296177 ~ 9296395 (+)
G222211 NA non-coding downstream 16607 9300016 ~ 9300229 (+)
G222212 NA non-coding downstream 16947 9300356 ~ 9300609 (+)
G222102 NA other upstream 215007 9067146 ~ 9068151 (+)
G222089 NA other upstream 247325 9035358 ~ 9035833 (+)
G221526 LOC106591640 other upstream 374430 8840224 ~ 8908728 (+)
G222287 NA other downstream 161638 9445047 ~ 9445704 (+)
G222345 LOC106594812 other downstream 322896 9606305 ~ 9611139 (+)
G222353 LOC106573525 other downstream 396351 9679760 ~ 9681752 (+)
sphk2 LOC106605743 other downstream 619703 9900809 ~ 9916529 (+)

Expression


Co-expression Network