G222539



Basic Information


Item Value
gene id G222539
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9306429 ~ 9306744 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU254160
ttccaaagggttcacatacttttcttgCCACTGTGGACTTGTTGTGAGAAGATTTCGTAGTTCACTGAAGTTCTGTGTTATTCTAGGAATGTTTCTGTTCCATGTTTCTGACGTCTGTAACAGTTGATTTATAACAACCTTCTTCTTTCATTTCCCCAttgcctctctttctcctctttcttcagtttcaatactgtcacaaaactctctctatttctcctctttcttcagtttcaatactgtcacaaaactctcgctctctttctcctctttcttcagtttcaatactgtcacaaaactctcactctctttctcc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU254160 True 316 lncRNA 0.36 1 9306429 9306744

Neighbor


gene id symbol gene type direction distance location
LOC110508553 LOC105018974 coding downstream 74471 9160983 ~ 9231958 (-)
LOC110500119 LOC105018975 coding downstream 155438 9122222 ~ 9150991 (-)
LOC110501040 LOC106605812 coding downstream 187992 9101425 ~ 9118437 (-)
LOC110520814 LOC106595728 coding downstream 255567 8988084 ~ 9050862 (-)
LOC110520856 LOC106591015 coding downstream 324146 8973956 ~ 8982283 (-)
LOC118945333 NA coding upstream 12902 9319354 ~ 9389195 (-)
LOC110520816 LOC100380759 coding upstream 40407 9347151 ~ 9371934 (-)
rprd2b LOC106605802 coding upstream 69755 9376499 ~ 9390272 (-)
LOC110508575 prpf3 coding upstream 83543 9390287 ~ 9401122 (-)
LOC110508582 LOC106575046 coding upstream 139520 9446264 ~ 9451249 (-)
G222538 NA non-coding downstream 508 9305714 ~ 9305921 (-)
G222532 NA non-coding downstream 6369 9299851 ~ 9300060 (-)
G222529 NA non-coding downstream 12600 9293589 ~ 9293829 (-)
G222522 NA non-coding downstream 29124 9275205 ~ 9277305 (-)
G222519 NA non-coding downstream 51528 9254401 ~ 9254901 (-)
G222540 NA non-coding upstream 482 9307226 ~ 9307479 (-)
G222545 NA non-coding upstream 9409 9316153 ~ 9316521 (-)
G222547 NA non-coding upstream 11089 9317833 ~ 9319323 (-)
G222465 NA other downstream 211213 9093180 ~ 9095216 (-)
G222023 LOC100136250 other downstream 357242 8853817 ~ 8949187 (-)
LOC110520835 ash1l other downstream 485362 8804651 ~ 8839679 (-)
G221986 NA other downstream 542545 8763119 ~ 8763884 (-)
G222607 LOC106574954 other upstream 188052 9494796 ~ 9496853 (-)
LOC110508584 LOC104949237 other upstream 224430 9528874 ~ 9551643 (-)
LOC110520821 LOC106574299 other upstream 255001 9559133 ~ 9594654 (-)
G222662 NA other upstream 310881 9617625 ~ 9622934 (-)
LOC118944443 LOC106573533 other upstream 365699 9665862 ~ 9673439 (-)

Expression



Co-expression Network