G222218


Basic Information

Item Value
gene id G222218
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9312997 ~ 9313213 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253727
GTACATATCAACTCaagaacacacagaaacagacaaagatacacacAAACAACTCACACACTTCCAGGTGGGTTTATGTGTAATCTGTTGGTCAGCTTCCTAACTGAACAACAGTTCAGACTTGTATTCTGACCTGGCTAATGATAAAGCATGTTTTCCAGCCTGTAGCCTTGACCTATAACCCTGAGATATGGACATGGATGTAGACTCCAACAAc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253727 True 217 lncRNA 0.41 1 9312997 9313213

Neighbor

gene id symbol gene type direction distance location
LOC110520813 LOC106605815 coding upstream 325151 8982594 ~ 8987846 (+)
LOC110517169 LOC106605893 coding upstream 374299 8932771 ~ 8938698 (+)
LOC118945318 LOC106575331 coding upstream 386940 8898021 ~ 8926057 (+)
LOC110520801 LOC106605893 coding upstream 400687 8906566 ~ 8912310 (+)
LOC110516768 LOC106605893 coding upstream 434344 8865764 ~ 8878653 (+)
LOC110520819 LOC106575022 coding downstream 150124 9463337 ~ 9483086 (+)
LOC118944441 NA coding downstream 172387 9485600 ~ 9486125 (+)
LOC110520820 LOC107573682 coding downstream 177120 9490333 ~ 9508263 (+)
LOC118945352 NA coding downstream 299681 9612894 ~ 9622952 (+)
LOC110536529 LOC106573824 coding downstream 375851 9688881 ~ 9692007 (+)
G222212 NA non-coding upstream 12388 9300356 ~ 9300609 (+)
G222211 NA non-coding upstream 12768 9300016 ~ 9300229 (+)
G222209 NA non-coding upstream 16602 9296177 ~ 9296395 (+)
G222208 NA non-coding upstream 19090 9293641 ~ 9293907 (+)
G222204 NA non-coding upstream 26892 9285463 ~ 9286105 (+)
G222246 LOC100380759 non-coding downstream 34276 9347489 ~ 9360744 (+)
G222275 NA non-coding downstream 91995 9405208 ~ 9405735 (+)
G222276 NA non-coding downstream 92835 9406048 ~ 9406382 (+)
G222281 NA non-coding downstream 103780 9416993 ~ 9417202 (+)
G222282 NA non-coding downstream 110994 9424207 ~ 9424467 (+)
G222102 NA other upstream 244846 9067146 ~ 9068151 (+)
G222089 NA other upstream 277164 9035358 ~ 9035833 (+)
G221526 LOC106591640 other upstream 404269 8840224 ~ 8908728 (+)
G222287 NA other downstream 131834 9445047 ~ 9445704 (+)
G222345 LOC106594812 other downstream 293092 9606305 ~ 9611139 (+)
G222353 LOC106573525 other downstream 366547 9679760 ~ 9681752 (+)
sphk2 LOC106605743 other downstream 589899 9900809 ~ 9916529 (+)

Expression


Co-expression Network