G222276


Basic Information

Item Value
gene id G222276
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9406048 ~ 9406382 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253789
GAAAATAGCTTATTCCATAACCTTTGAAATTCAACTCAACTGGAAATGATGTTCAAGACCAAACCATGGGTTCTTGTagtaagagagactaaaaaccctctttagtgtaatcaggaactattctgagaaataaaacaacaaataataatttaaataaaagGGTAGCTACTATTTTAAGTACATATGAAAACTGATCataaaataattgaataacaaaatgttttacatataaaCGTTCTTAAGACCTTTTTTGGAAATAAGTATTAATAACTAAATAGAATAATAACCGTGTAAAGTCAGAGCAGACCTGTATGCCATTTAAAACAGTATCTTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253789 True 335 lncRNA 0.28 1 9406048 9406382

Neighbor

gene id symbol gene type direction distance location
LOC110520813 LOC106605815 coding upstream 418202 8982594 ~ 8987846 (+)
LOC110517169 LOC106605893 coding upstream 467350 8932771 ~ 8938698 (+)
LOC118945318 LOC106575331 coding upstream 479991 8898021 ~ 8926057 (+)
LOC110520801 LOC106605893 coding upstream 493738 8906566 ~ 8912310 (+)
LOC110516768 LOC106605893 coding upstream 527395 8865764 ~ 8878653 (+)
LOC110520819 LOC106575022 coding downstream 56955 9463337 ~ 9483086 (+)
LOC118944441 NA coding downstream 79218 9485600 ~ 9486125 (+)
LOC110520820 LOC107573682 coding downstream 83951 9490333 ~ 9508263 (+)
LOC118945352 NA coding downstream 206512 9612894 ~ 9622952 (+)
LOC110536529 LOC106573824 coding downstream 282682 9688881 ~ 9692007 (+)
G222275 NA non-coding upstream 313 9405208 ~ 9405735 (+)
G222246 LOC100380759 non-coding upstream 45304 9347489 ~ 9360744 (+)
G222218 NA non-coding upstream 92835 9312997 ~ 9313213 (+)
G222212 NA non-coding upstream 105439 9300356 ~ 9300609 (+)
G222211 NA non-coding upstream 105819 9300016 ~ 9300229 (+)
G222281 NA non-coding downstream 10611 9416993 ~ 9417202 (+)
G222282 NA non-coding downstream 17825 9424207 ~ 9424467 (+)
G222284 NA non-coding downstream 22429 9428811 ~ 9431800 (+)
G222285 NA non-coding downstream 31793 9438175 ~ 9439407 (+)
G222286 NA non-coding downstream 35455 9441837 ~ 9444817 (+)
G222102 NA other upstream 337897 9067146 ~ 9068151 (+)
G222089 NA other upstream 370215 9035358 ~ 9035833 (+)
G221526 LOC106591640 other upstream 497320 8840224 ~ 8908728 (+)
G222287 NA other downstream 38665 9445047 ~ 9445704 (+)
G222345 LOC106594812 other downstream 199923 9606305 ~ 9611139 (+)
G222353 LOC106573525 other downstream 273378 9679760 ~ 9681752 (+)
sphk2 LOC106605743 other downstream 496730 9900809 ~ 9916529 (+)

Expression


Co-expression Network