G222282


Basic Information

Item Value
gene id G222282
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9424207 ~ 9424467 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253795
cagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcagccccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253795 True 261 lncRNA 0.46 1 9424207 9424467

Neighbor

gene id symbol gene type direction distance location
LOC110520813 LOC106605815 coding upstream 436361 8982594 ~ 8987846 (+)
LOC110517169 LOC106605893 coding upstream 485509 8932771 ~ 8938698 (+)
LOC118945318 LOC106575331 coding upstream 498150 8898021 ~ 8926057 (+)
LOC110520801 LOC106605893 coding upstream 511897 8906566 ~ 8912310 (+)
LOC110516768 LOC106605893 coding upstream 545554 8865764 ~ 8878653 (+)
LOC110520819 LOC106575022 coding downstream 38870 9463337 ~ 9483086 (+)
LOC118944441 NA coding downstream 61133 9485600 ~ 9486125 (+)
LOC110520820 LOC107573682 coding downstream 65866 9490333 ~ 9508263 (+)
LOC118945352 NA coding downstream 188427 9612894 ~ 9622952 (+)
LOC110536529 LOC106573824 coding downstream 264597 9688881 ~ 9692007 (+)
G222281 NA non-coding upstream 7005 9416993 ~ 9417202 (+)
G222276 NA non-coding upstream 17825 9406048 ~ 9406382 (+)
G222275 NA non-coding upstream 18472 9405208 ~ 9405735 (+)
G222246 LOC100380759 non-coding upstream 63463 9347489 ~ 9360744 (+)
G222218 NA non-coding upstream 110994 9312997 ~ 9313213 (+)
G222284 NA non-coding downstream 4344 9428811 ~ 9431800 (+)
G222285 NA non-coding downstream 13708 9438175 ~ 9439407 (+)
G222286 NA non-coding downstream 17370 9441837 ~ 9444817 (+)
G222295 NA non-coding downstream 63643 9488110 ~ 9494376 (+)
G222102 NA other upstream 356056 9067146 ~ 9068151 (+)
G222089 NA other upstream 388374 9035358 ~ 9035833 (+)
G221526 LOC106591640 other upstream 515479 8840224 ~ 8908728 (+)
G222287 NA other downstream 20580 9445047 ~ 9445704 (+)
G222345 LOC106594812 other downstream 181838 9606305 ~ 9611139 (+)
G222353 LOC106573525 other downstream 255293 9679760 ~ 9681752 (+)
sphk2 LOC106605743 other downstream 478645 9900809 ~ 9916529 (+)

Expression


Co-expression Network