G222295


Basic Information

Item Value
gene id G222295
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9488110 ~ 9494376 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253811
gtaggctttgttactttggtcccagctctctgcaggtcattcactcggtcttgtgatcattttgaccccacggggtgagatcttgcgtggagccccagatcgagggagattatcagtggtcttgtatgtcttccatttcctaataattgctcccacagttgatttcttcaaaccaagctgcttacctattgcagattcagtcttcccagcctggtgcaggtctacaattttgtttctggtgtcctttgacagctctttggtcttggccatagtggagtttggagtgtgactgtttgaggttgtggacaggtgtcttttatactgataaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253811 True 330 lncRNA 0.46 2 9488110 9494376

Neighbor

gene id symbol gene type direction distance location
LOC118944441 NA coding upstream 1985 9485600 ~ 9486125 (+)
LOC110520819 LOC106575022 coding upstream 5024 9463337 ~ 9483086 (+)
LOC110520813 LOC106605815 coding upstream 500264 8982594 ~ 8987846 (+)
LOC110517169 LOC106605893 coding upstream 549412 8932771 ~ 8938698 (+)
LOC118945318 LOC106575331 coding upstream 562053 8898021 ~ 8926057 (+)
LOC118945352 NA coding downstream 118518 9612894 ~ 9622952 (+)
LOC110536529 LOC106573824 coding downstream 194688 9688881 ~ 9692007 (+)
LOC110536497 LOC106574921 coding downstream 230999 9725375 ~ 9764307 (+)
LOC110508601 LOC105018956 coding downstream 274424 9768800 ~ 9882291 (+)
LOC110520822 LOC106605747 coding downstream 392495 9886871 ~ 9888193 (+)
G222286 NA non-coding upstream 43293 9441837 ~ 9444817 (+)
G222285 NA non-coding upstream 48703 9438175 ~ 9439407 (+)
G222284 NA non-coding upstream 56310 9428811 ~ 9431800 (+)
G222282 NA non-coding upstream 63643 9424207 ~ 9424467 (+)
G222281 NA non-coding upstream 70908 9416993 ~ 9417202 (+)
LOC110520820 LOC107573682 non-coding downstream 12486 9490333 ~ 9508263 (+)
G222309 LOC106605788 non-coding downstream 31261 9525637 ~ 9530011 (+)
G222334 NA non-coding downstream 69083 9563459 ~ 9563687 (+)
G222335 NA non-coding downstream 69467 9563843 ~ 9564060 (+)
G222336 LOC103388275 non-coding downstream 74872 9569248 ~ 9569740 (+)
G222287 NA other upstream 42406 9445047 ~ 9445704 (+)
G222102 NA other upstream 419959 9067146 ~ 9068151 (+)
G222089 NA other upstream 452277 9035358 ~ 9035833 (+)
G221526 LOC106591640 other upstream 579382 8840224 ~ 8908728 (+)
G222345 LOC106594812 other downstream 111929 9606305 ~ 9611139 (+)
G222353 LOC106573525 other downstream 185384 9679760 ~ 9681752 (+)
sphk2 LOC106605743 other downstream 408736 9900809 ~ 9916529 (+)
LOC110508845 LOC106605771 other downstream 779749 10267749 ~ 10276176 (+)

Expression


Co-expression Network