G222335


Basic Information

Item Value
gene id G222335
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9563843 ~ 9564060 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253875
acacactatactgctttactacagtataatacacactatactgcttcactacagtataatacacactatactgctttactacagtataatacacactatactgctttactacagtataatacacactatactgctgctgcttcactacagtataatacacactatactgcttcactacagtataatacacactatactgcttcactacagtataatac

Function

NR:

description
PREDICTED: involucrin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253875 True 218 lncRNA 0.52 1 9563843 9564060

Neighbor

gene id symbol gene type direction distance location
LOC110520820 LOC107573682 coding upstream 55580 9490333 ~ 9508263 (+)
LOC118944441 NA coding upstream 77718 9485600 ~ 9486125 (+)
LOC110520819 LOC106575022 coding upstream 80757 9463337 ~ 9483086 (+)
LOC110520813 LOC106605815 coding upstream 575997 8982594 ~ 8987846 (+)
LOC110517169 LOC106605893 coding upstream 625145 8932771 ~ 8938698 (+)
LOC118945352 NA coding downstream 48834 9612894 ~ 9622952 (+)
LOC110536529 LOC106573824 coding downstream 125004 9688881 ~ 9692007 (+)
LOC110536497 LOC106574921 coding downstream 161315 9725375 ~ 9764307 (+)
LOC110508601 LOC105018956 coding downstream 204740 9768800 ~ 9882291 (+)
LOC110520822 LOC106605747 coding downstream 322811 9886871 ~ 9888193 (+)
G222334 NA non-coding upstream 156 9563459 ~ 9563687 (+)
G222309 LOC106605788 non-coding upstream 33832 9525637 ~ 9530011 (+)
G222295 NA non-coding upstream 69467 9488110 ~ 9494376 (+)
G222286 NA non-coding upstream 119026 9441837 ~ 9444817 (+)
G222336 LOC103388275 non-coding downstream 5188 9569248 ~ 9569740 (+)
G222337 NA non-coding downstream 7363 9571423 ~ 9571707 (+)
G222338 LOC106574633 non-coding downstream 7780 9571840 ~ 9572272 (+)
G222339 NA non-coding downstream 8470 9572530 ~ 9572736 (+)
G222342 NA non-coding downstream 20156 9584216 ~ 9584600 (+)
G222287 NA other upstream 118139 9445047 ~ 9445704 (+)
G222102 NA other upstream 495692 9067146 ~ 9068151 (+)
G222089 NA other upstream 528010 9035358 ~ 9035833 (+)
G221539 NA other upstream 699867 8861500 ~ 8863976 (+)
G222345 LOC106594812 other downstream 42245 9606305 ~ 9611139 (+)
G222353 LOC106573525 other downstream 115700 9679760 ~ 9681752 (+)
sphk2 LOC106605743 other downstream 339052 9900809 ~ 9916529 (+)
LOC110508845 LOC106605771 other downstream 710065 10267749 ~ 10276176 (+)
LOC110508886 LOC106605776 other downstream 747622 10306848 ~ 10314535 (+)

Expression


Co-expression Network