Gene
RNA
| Item | Value |
|---|---|
| gene id | G222339 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 9572530 ~ 9572736 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU253879 | True | 207 | lncRNA | 0.51 | 1 | 9572530 | 9572736 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520820 | LOC107573682 | coding | upstream | 64267 | 9490333 ~ 9508263 (+) |
| LOC118944441 | NA | coding | upstream | 86405 | 9485600 ~ 9486125 (+) |
| LOC110520819 | LOC106575022 | coding | upstream | 89444 | 9463337 ~ 9483086 (+) |
| LOC110520813 | LOC106605815 | coding | upstream | 584684 | 8982594 ~ 8987846 (+) |
| LOC110517169 | LOC106605893 | coding | upstream | 633832 | 8932771 ~ 8938698 (+) |
| LOC118945352 | NA | coding | downstream | 40158 | 9612894 ~ 9622952 (+) |
| LOC110536529 | LOC106573824 | coding | downstream | 116328 | 9688881 ~ 9692007 (+) |
| LOC110536497 | LOC106574921 | coding | downstream | 152639 | 9725375 ~ 9764307 (+) |
| LOC110508601 | LOC105018956 | coding | downstream | 196064 | 9768800 ~ 9882291 (+) |
| LOC110520822 | LOC106605747 | coding | downstream | 314135 | 9886871 ~ 9888193 (+) |
| G222338 | LOC106574633 | non-coding | upstream | 258 | 9571840 ~ 9572272 (+) |
| G222337 | NA | non-coding | upstream | 823 | 9571423 ~ 9571707 (+) |
| G222336 | LOC103388275 | non-coding | upstream | 2790 | 9569248 ~ 9569740 (+) |
| G222335 | NA | non-coding | upstream | 8470 | 9563843 ~ 9564060 (+) |
| G222334 | NA | non-coding | upstream | 8843 | 9563459 ~ 9563687 (+) |
| G222342 | NA | non-coding | downstream | 11480 | 9584216 ~ 9584600 (+) |
| G222349 | NA | non-coding | downstream | 20201 | 9592937 ~ 9594052 (+) |
| G222346 | NA | non-coding | downstream | 30464 | 9603200 ~ 9612674 (+) |
| G222366 | NA | non-coding | downstream | 73435 | 9646171 ~ 9669060 (+) |
| G222287 | NA | other | upstream | 126826 | 9445047 ~ 9445704 (+) |
| G222102 | NA | other | upstream | 504379 | 9067146 ~ 9068151 (+) |
| G222089 | NA | other | upstream | 536697 | 9035358 ~ 9035833 (+) |
| G221539 | NA | other | upstream | 708554 | 8861500 ~ 8863976 (+) |
| G222345 | LOC106594812 | other | downstream | 33569 | 9606305 ~ 9611139 (+) |
| G222353 | LOC106573525 | other | downstream | 107024 | 9679760 ~ 9681752 (+) |
| sphk2 | LOC106605743 | other | downstream | 330376 | 9900809 ~ 9916529 (+) |
| LOC110508845 | LOC106605771 | other | downstream | 701389 | 10267749 ~ 10276176 (+) |
| LOC110508886 | LOC106605776 | other | downstream | 738946 | 10306848 ~ 10314535 (+) |
