G222342



Basic Information


Item Value
gene id G222342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9584216 ~ 9584600 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU253882
ggctgtccccataggagaaccctttttgtttccaggtagaactcatTTGAAATCCATGTAGAACCACAGAGAATCCTTaatgggttcttcaaagggtttgccaatgggaacagccgaagaacccttttaggttctagatagcaccttgttTTCTAAGTGCATATGCCCTATGGCTCGGTGTGGTTGGCTAAAAGGGAACCAGATGCATAGTGAGAGACATTAGTTCAATCTGTATTCATCCTGTTACACCCACATAAACCAATCTGTATTCATCCTGTTACACCCACATAAACCAATCTGTATTCATCCTGTTACACCCACATAAACCAATCTGTATTCATCCTGTTACACCCACATAAACCAATCTGTATTCATCCTGTTACAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU253882 True 385 lncRNA 0.42 1 9584216 9584600
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110520820 LOC107573682 coding upstream 75953 9490333 ~ 9508263 (+)
LOC118944441 NA coding upstream 98091 9485600 ~ 9486125 (+)
LOC110520819 LOC106575022 coding upstream 101130 9463337 ~ 9483086 (+)
LOC110520813 LOC106605815 coding upstream 596370 8982594 ~ 8987846 (+)
LOC110517169 LOC106605893 coding upstream 645518 8932771 ~ 8938698 (+)
LOC118945352 NA coding downstream 28294 9612894 ~ 9622952 (+)
LOC110536529 LOC106573824 coding downstream 104464 9688881 ~ 9692007 (+)
LOC110536497 LOC106574921 coding downstream 140775 9725375 ~ 9764307 (+)
LOC110508601 LOC105018956 coding downstream 184200 9768800 ~ 9882291 (+)
LOC110520822 LOC106605747 coding downstream 302271 9886871 ~ 9888193 (+)
G222339 NA non-coding upstream 11480 9572530 ~ 9572736 (+)
G222338 LOC106574633 non-coding upstream 11944 9571840 ~ 9572272 (+)
G222337 NA non-coding upstream 12509 9571423 ~ 9571707 (+)
G222336 LOC103388275 non-coding upstream 14476 9569248 ~ 9569740 (+)
G222335 NA non-coding upstream 20156 9563843 ~ 9564060 (+)
G222349 NA non-coding downstream 8337 9592937 ~ 9594052 (+)
G222346 NA non-coding downstream 18600 9603200 ~ 9612674 (+)
G222366 NA non-coding downstream 61571 9646171 ~ 9669060 (+)
G222371 NA non-coding downstream 71820 9656420 ~ 9657013 (+)
G222287 NA other upstream 138512 9445047 ~ 9445704 (+)
G222102 NA other upstream 516065 9067146 ~ 9068151 (+)
G222089 NA other upstream 548383 9035358 ~ 9035833 (+)
G221539 NA other upstream 720240 8861500 ~ 8863976 (+)
G222345 LOC106594812 other downstream 21705 9606305 ~ 9611139 (+)
G222353 LOC106573525 other downstream 95160 9679760 ~ 9681752 (+)
sphk2 LOC106605743 other downstream 318512 9900809 ~ 9916529 (+)
LOC110508845 LOC106605771 other downstream 689525 10267749 ~ 10276176 (+)
LOC110508886 LOC106605776 other downstream 727082 10306848 ~ 10314535 (+)

Expression


G222342 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G222342 Expression in each Bioproject

Bar chart with 8 bars.
G222342 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
End of interactive chart.

Co-expression Network