G222346


Basic Information

Item Value
gene id G222346
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9603200 ~ 9612674 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253889
GTTATGATAAGGTTATGCTCCAAGCTTTATTTGGAGAGAGGCAGTGCTTCCAAGACAGAATTgaataaacacacaaaaacattGTCTACATTTAAATCACTTTCAATGAACATGGAAAAAATATTGACTTTTCATCGTAATCTCTAAACTGTTGTTTTGTTTATGTACTTCATCTCCACATAAGGGAAATTTATTAATTCTAGTTCTATGCTATCTATGTAGTTAGTGTTCCAGTTAGTGTGTCTGTTAGGCTATGTGCCACTTAGGATTGGTGGGCCTGTCAGCCAGTCAGTGGTAGTGTCCAATAAGAACAGAGTGTTTAGGGCACGTGGACTGCCCTCATGATGTTAGTGTGACCAGAACCAGGGATCCAGCCGGTCACCACGATCACCATGTCACCTGTCTTGAAGAAGCCCCTGGCCTTTCCTACACACAGtgagggagggtggaagagggaggcagacacagtgagggagggtggaagagggaggcagacacagtgagggaggatggatgagggaggcagacacagtgagggagggtggaagggggaggaagtcacagtgagggagggtggaagggggAGGAAGTCACAATGAGGGAGGGTGGAAGTGGGAGGCAGACACAGTGAGGGCGGGTGGAAGAGGGaggcagacacagtgagggagggtggaagggggaggcagacacagtAAGGGAGGGTGGAAGGTGGAGGCAGACATAGTGAGATAGTGAAAAGAGACGTGAATATCATCCATATGACACTAAACCTACGTTCTCTCTTTCCCACTTTCTCCCCATCTTTCccactccttttctctctctctcacacacacccaccccttcaacacacacagacctatgTTCATGCCGAAGTTGACTCTGTTGTCTACATCATCGGCCCAGACGGGGGCAGGGAGGGGGTGGAACAGCACTGGGAACACACCCCTCAGCAGCTGGGCCTGACGTGCCAcctggagacagaacacacactgcCCCCGTCAGTCCACCCAAACTAACAGCCTTTACCTTTACCCTGAAGGAGGCAGGTAACAGCCCCACTCTACAGGCTACAACCACATATCAAACAacaatcctaaacctaaccttagggGTTGTGTCTCGTAGAGTGGGCCAGTATTCAATCTCACCTGAGGACTTCTTGTTACCGCGACGATGGGACAGCGTGGGCGATACCGGGACAGGAGCTGGGCtgacctgggagagagagagggatagaacgAGCAGAAAGGGAGAGGgttggagtctgtttgattgagtatgcggacaggtgtcttttatacaggtaacgagttcaaacaggtgcagttaatacagg

Function

NR:

description
PREDICTED: pyruvate kinase PKLR-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253889 True 1339 lncRNA 0.50 3 9603200 9612674

Neighbor

gene id symbol gene type direction distance location
LOC110520820 LOC107573682 coding upstream 94937 9490333 ~ 9508263 (+)
LOC118944441 NA coding upstream 117075 9485600 ~ 9486125 (+)
LOC110520819 LOC106575022 coding upstream 120114 9463337 ~ 9483086 (+)
LOC110520813 LOC106605815 coding upstream 615354 8982594 ~ 8987846 (+)
LOC110517169 LOC106605893 coding upstream 664502 8932771 ~ 8938698 (+)
LOC118945352 NA coding downstream 220 9612894 ~ 9622952 (+)
LOC110536529 LOC106573824 coding downstream 76390 9688881 ~ 9692007 (+)
LOC110536497 LOC106574921 coding downstream 112701 9725375 ~ 9764307 (+)
LOC110508601 LOC105018956 coding downstream 156126 9768800 ~ 9882291 (+)
LOC110520822 LOC106605747 coding downstream 274197 9886871 ~ 9888193 (+)
G222349 NA non-coding upstream 9148 9592937 ~ 9594052 (+)
G222342 NA non-coding upstream 18600 9584216 ~ 9584600 (+)
G222339 NA non-coding upstream 30464 9572530 ~ 9572736 (+)
G222338 LOC106574633 non-coding upstream 30928 9571840 ~ 9572272 (+)
G222337 NA non-coding upstream 31493 9571423 ~ 9571707 (+)
G222366 NA non-coding downstream 33497 9646171 ~ 9669060 (+)
G222371 NA non-coding downstream 43746 9656420 ~ 9657013 (+)
G222381 NA non-coding downstream 66355 9679029 ~ 9679295 (+)
G222354 NA non-coding downstream 69298 9681972 ~ 9683128 (+)
G222287 NA other upstream 157496 9445047 ~ 9445704 (+)
G222102 NA other upstream 535049 9067146 ~ 9068151 (+)
G222089 NA other upstream 567367 9035358 ~ 9035833 (+)
G221539 NA other upstream 739224 8861500 ~ 8863976 (+)
G222353 LOC106573525 other downstream 67086 9679760 ~ 9681752 (+)
sphk2 LOC106605743 other downstream 290438 9900809 ~ 9916529 (+)
LOC110508845 LOC106605771 other downstream 661451 10267749 ~ 10276176 (+)
LOC110508886 LOC106605776 other downstream 699008 10306848 ~ 10314535 (+)
LOC110520833 LOC106575226 other downstream 1103977 10716613 ~ 10767669 (+)

Expression


Co-expression Network