G222661



Basic Information


Item Value
gene id G222661
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9612664 ~ 9623056 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU254305
gagaacaagtatttgatacactgacaattttgcaggttttcctacttacaaagcatgtagaggtctgtaattttttatcataggtacacttcaactatgagagacggaatctaaaacaaaaatccagaaaatcacattgtatgatttttaagtaattcatttgcattttattgcatgacataagtatttgatcacttaccaaccagtaagaattccgtctctcacagacctgttagtttttctttaagaagtcctcctgttctccactcattacctgtattaac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU254305 True 284 lncRNA 0.33 2 9612664 9623056

Neighbor


gene id symbol gene type direction distance location
LOC110520821 LOC106574299 coding downstream 18010 9559133 ~ 9594654 (-)
LOC110508584 LOC104949237 coding downstream 61021 9528874 ~ 9551643 (-)
LOC110508594 LOC106605789 coding downstream 87351 9515908 ~ 9525313 (-)
LOC110508582 LOC106575046 coding downstream 161415 9446264 ~ 9451249 (-)
LOC110508575 prpf3 coding downstream 211542 9390287 ~ 9401122 (-)
cyp11b cyp11b coding upstream 18582 9641638 ~ 9653952 (-)
LOC118945353 LOC106594169 coding upstream 31237 9654293 ~ 9656911 (-)
LOC118944443 LOC106573533 coding upstream 42806 9665862 ~ 9673439 (-)
LOC110534283 LOC106573819 coding upstream 56702 9679758 ~ 9689081 (-)
LOC110536579 LOC106593149 coding upstream 85746 9708802 ~ 9713188 (-)
G222658 NA non-coding downstream 13007 9595705 ~ 9599657 (-)
G222657 NA non-coding downstream 17334 9595020 ~ 9595330 (-)
G222607 LOC106574954 non-coding downstream 115811 9494796 ~ 9496853 (-)
G222600 NA non-coding downstream 135764 9474040 ~ 9476900 (-)
G222511 NA non-coding downstream 166962 9445037 ~ 9445702 (-)
G222672 NA non-coding upstream 14193 9637249 ~ 9637907 (-)
G222680 NA non-coding upstream 34077 9657133 ~ 9659694 (-)
G222685 NA non-coding upstream 52882 9675938 ~ 9676294 (-)
G222686 NA non-coding upstream 53424 9676480 ~ 9676700 (-)
LOC110501040 LOC106605812 other downstream 494291 9101425 ~ 9118437 (-)
G222465 NA other downstream 517448 9093180 ~ 9095216 (-)
LOC110508696 ndufa3 other upstream 378359 10001415 ~ 10002941 (-)
G223070 NA other upstream 389905 10012961 ~ 10014892 (-)
LOC110508724 prpf31 other upstream 397592 10019313 ~ 10024005 (-)

Expression



Co-expression Network