Gene
RNA
| Item | Value |
|---|---|
| gene id | G222672 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 9637249 ~ 9637907 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU254320 | True | 231 | lncRNA | 0.53 | 2 | 9637249 | 9637907 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520821 | LOC106574299 | coding | downstream | 42595 | 9559133 ~ 9594654 (-) |
| LOC110508584 | LOC104949237 | coding | downstream | 85606 | 9528874 ~ 9551643 (-) |
| LOC110508594 | LOC106605789 | coding | downstream | 111936 | 9515908 ~ 9525313 (-) |
| LOC110508582 | LOC106575046 | coding | downstream | 186000 | 9446264 ~ 9451249 (-) |
| LOC110508575 | prpf3 | coding | downstream | 236127 | 9390287 ~ 9401122 (-) |
| cyp11b | cyp11b | coding | upstream | 3731 | 9641638 ~ 9653952 (-) |
| LOC118945353 | LOC106594169 | coding | upstream | 16386 | 9654293 ~ 9656911 (-) |
| LOC118944443 | LOC106573533 | coding | upstream | 27955 | 9665862 ~ 9673439 (-) |
| LOC110534283 | LOC106573819 | coding | upstream | 41851 | 9679758 ~ 9689081 (-) |
| LOC110536579 | LOC106593149 | coding | upstream | 70895 | 9708802 ~ 9713188 (-) |
| G222661 | NA | non-coding | downstream | 14193 | 9612664 ~ 9623056 (-) |
| G222662 | NA | non-coding | downstream | 14315 | 9617625 ~ 9622934 (-) |
| G222658 | NA | non-coding | downstream | 37592 | 9595705 ~ 9599657 (-) |
| G222657 | NA | non-coding | downstream | 41919 | 9595020 ~ 9595330 (-) |
| G222607 | LOC106574954 | non-coding | downstream | 140396 | 9494796 ~ 9496853 (-) |
| G222680 | NA | non-coding | upstream | 19226 | 9657133 ~ 9659694 (-) |
| G222685 | NA | non-coding | upstream | 38031 | 9675938 ~ 9676294 (-) |
| G222686 | NA | non-coding | upstream | 38573 | 9676480 ~ 9676700 (-) |
| G222665 | NA | non-coding | upstream | 94248 | 9732155 ~ 9735857 (-) |
| LOC110501040 | LOC106605812 | other | downstream | 518876 | 9101425 ~ 9118437 (-) |
| LOC110508696 | ndufa3 | other | upstream | 363508 | 10001415 ~ 10002941 (-) |
| G223070 | NA | other | upstream | 375054 | 10012961 ~ 10014892 (-) |
| LOC110508724 | prpf31 | other | upstream | 382741 | 10019313 ~ 10024005 (-) |
