Gene
RNA
| Item | Value |
|---|---|
| gene id | G222371 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 9656420 ~ 9657013 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU253917 | False | 410 | lncRNA | 0.48 | 2 | 9656420 | 9656931 |
| TU253918 | True | 458 | lncRNA | 0.49 | 2 | 9656454 | 9657013 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118945352 | NA | coding | upstream | 33468 | 9612894 ~ 9622952 (+) |
| LOC110520820 | LOC107573682 | coding | upstream | 148157 | 9490333 ~ 9508263 (+) |
| LOC118944441 | NA | coding | upstream | 170295 | 9485600 ~ 9486125 (+) |
| LOC110520819 | LOC106575022 | coding | upstream | 173334 | 9463337 ~ 9483086 (+) |
| LOC110520813 | LOC106605815 | coding | upstream | 668574 | 8982594 ~ 8987846 (+) |
| LOC110536529 | LOC106573824 | coding | downstream | 32051 | 9688881 ~ 9692007 (+) |
| LOC110536497 | LOC106574921 | coding | downstream | 68362 | 9725375 ~ 9764307 (+) |
| LOC110508601 | LOC105018956 | coding | downstream | 111787 | 9768800 ~ 9882291 (+) |
| LOC110520822 | LOC106605747 | coding | downstream | 229858 | 9886871 ~ 9888193 (+) |
| LOC110508611 | rpl18 | coding | downstream | 236248 | 9893261 ~ 9900476 (+) |
| G222346 | NA | non-coding | upstream | 43746 | 9603200 ~ 9612674 (+) |
| G222349 | NA | non-coding | upstream | 62368 | 9592937 ~ 9594052 (+) |
| G222342 | NA | non-coding | upstream | 71820 | 9584216 ~ 9584600 (+) |
| G222339 | NA | non-coding | upstream | 83684 | 9572530 ~ 9572736 (+) |
| G222381 | NA | non-coding | downstream | 22016 | 9679029 ~ 9679295 (+) |
| G222354 | NA | non-coding | downstream | 24959 | 9681972 ~ 9683128 (+) |
| G222388 | NA | non-coding | downstream | 44995 | 9702008 ~ 9702574 (+) |
| G222723 | NA | non-coding | downstream | 108908 | 9765921 ~ 9767809 (+) |
| G222345 | LOC106594812 | other | upstream | 45281 | 9606305 ~ 9611139 (+) |
| G222287 | NA | other | upstream | 210716 | 9445047 ~ 9445704 (+) |
| G222102 | NA | other | upstream | 588269 | 9067146 ~ 9068151 (+) |
| G222089 | NA | other | upstream | 620587 | 9035358 ~ 9035833 (+) |
| G222353 | LOC106573525 | other | downstream | 22747 | 9679760 ~ 9681752 (+) |
| sphk2 | LOC106605743 | other | downstream | 246099 | 9900809 ~ 9916529 (+) |
| LOC110508845 | LOC106605771 | other | downstream | 617112 | 10267749 ~ 10276176 (+) |
| LOC110508886 | LOC106605776 | other | downstream | 654669 | 10306848 ~ 10314535 (+) |
| LOC110520833 | LOC106575226 | other | downstream | 1059638 | 10716613 ~ 10767669 (+) |
