G222724



Basic Information


Item Value
gene id G222724
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9766126 ~ 9767809 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU254392
TGACTCATATCAATCAATGTGTTTTATTTGCTCTACAGTGCCATTCTTTTTCACATGGAAGTGCTTTCTGCCACAAACAGTAGTGCTTTTTTTGTGATACAACAGAGAAGGATGGGAAACGAATACAGTGGTATCTGTAGAAAAAAATAATAGAGCACAGCTAGTAACAACCTGATTCCACTAACATACATCCCAACATACCTTGACCTGCAATATCACAATTTTATTCTGGAATCTAATAAAGCAACCAACCAGGAAGTCATCAAGTAATCCATCTggctatgttgttgttgtgtgggatgcgtaaaaaaaaaagactaaCACAGAGGTCAGAGTCCTGGTGGTCAGGGTTCAAGTTACCCCCCCACAGGAAGTGGAGCAGACAGGACTGGCCATTAACCTATAAATAGAACTCGGTGGCAATGGAGACATAGAAAAATAAGGAAAGACACGGAAATTGAATAAATGTCAATAACACCAACTATAACCGATCAATATGGTTGTAAATCATATCATGGAATCTGCTTTAAAAGGTGAAATATCCATGTTTCCTGTTCaaaaggtcagtgtgtgtgaagtGCTTctttctatatacagtatgtgacgTCTTAAAATGCCATTTCAATAGCAGTTTGTGTGCTTTTACAGTGCTTTGTATGTACGTAGTGTCCATAGTGTCAACTTACTTCTGTGCAAAGATGCAAGTCAAAGTTTCAGAGTTGTCTGTCCTTGTAGTAGGTAGAACATTTACAGCCCTGTTGTATCATCTAGTGGTCAAGACAATTGTTCAACACTTTACATATCATGTAGATTCATGATATATTGTGCATGGTATCTGCTGGTAAGGTGCATAACCCAATGATTTTGAATTGTAATACTGAAAAAGGAAACTGAATAGATTCTATTTGAAATAATGACTTAGTTATTATGTAATACCACACATGGCAGtttaacttaatgtaaagtgtgacTAAATATTGTGGTAGTAGCGGCATAGAAGTTAGAAGTCTTCATCTCTCAATAACATCAGTATACATATTTCAGAAACCATCACTTTCAGAAGAGTTACACGATTCAACAAAATAGACAGGCAATAAAAACATCTAATTTGAACATTGCAAATCTTGTGCTAGTTATAGAATAACACCATAGACTTCTTTTTGAAGGCACCGCCCAATGCATTAGTCTTCCACATAGTGGGAGACAGACACCAACCAAAGCAGAATCATAGAATTCAGGATTAGTCATCCATTCTAATTCTTTGAACAGAACCTCTCTCAGAGAACAGAATGTCACAGAAATTCAATTCCTCCTCAGGTGGTTTGCCAGTGCAGTTGTGAGCCCTCACAGTTTACAATAAGAACAGGAAGCTATAGGGAGTGGTCAGGGAGGTTTTCCTTACGTAAATGTACTGCAGTGAAGTGACAGTTGTACGTTTCAGGTCCTCAGTACATGGTGGTCATGGCAGTCCAACAGGTTTACGGTCCATTTCCAGTCCCAGTTTAGGGTGCTCTGCCAAGGACTGGACACTTCCAACAATGTACCTTAAAGGTAAACTCTGCTAAATGACGTTACCACGAGTAGCACTGCAGTTATTGAGATGAGTGAGACACAGGACTTCactctcacagtcacacacacacgggtgAAAGTAGATGTCATTTCTTCTCAGTATGGGACCTCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU254392 True 1684 lncRNA 0.39 1 9766126 9767809

Neighbor


gene id symbol gene type direction distance location
LOC110536579 LOC106593149 coding downstream 52938 9708802 ~ 9713188 (-)
LOC110534283 LOC106573819 coding downstream 77045 9679758 ~ 9689081 (-)
LOC118944443 LOC106573533 coding downstream 92738 9665862 ~ 9673439 (-)
LOC118945353 LOC106594169 coding downstream 109215 9654293 ~ 9656911 (-)
cyp11b cyp11b coding downstream 112174 9641638 ~ 9653952 (-)
LOC110508630 LOC106605751 coding upstream 175272 9943081 ~ 9960032 (-)
LOC110508696 ndufa3 coding upstream 233636 10001415 ~ 10002941 (-)
LOC110508724 prpf31 coding upstream 251504 10019313 ~ 10024005 (-)
LOC110520824 lmtk3 coding upstream 256639 10024448 ~ 10047484 (-)
LOC110508742 LOC106577219 coding upstream 279826 10047635 ~ 10053368 (-)
G222665 NA non-coding downstream 30269 9732155 ~ 9735857 (-)
G222686 NA non-coding downstream 89426 9676480 ~ 9676700 (-)
G222685 NA non-coding downstream 89832 9675938 ~ 9676294 (-)
G222680 NA non-coding downstream 106432 9657133 ~ 9659694 (-)
G222961 NA non-coding upstream 34635 9802444 ~ 9809481 (-)
G222982 NA non-coding upstream 69164 9836973 ~ 9838939 (-)
G223001 NA non-coding upstream 93803 9861612 ~ 9862114 (-)
G222995 NA non-coding upstream 110619 9878428 ~ 9882261 (-)
G223012 LOC106577306 non-coding upstream 125596 9893405 ~ 9896758 (-)
G222662 NA other downstream 143192 9617625 ~ 9622934 (-)
LOC110520821 LOC106574299 other downstream 203161 9559133 ~ 9594654 (-)
LOC110508584 LOC104949237 other downstream 214886 9528874 ~ 9551643 (-)
G223070 NA other upstream 245152 10012961 ~ 10014892 (-)
znf628 LOC106605829 other upstream 1303137 11068525 ~ 11079570 (-)
G223942 LOC106576860 other upstream 1404311 11172120 ~ 11174367 (-)

Expression



Co-expression Network