Gene
RNA
| Item | Value |
|---|---|
| gene id | G222743 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 9808039 ~ 9809141 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU254414 | True | 578 | lncRNA | 0.40 | 2 | 9808039 | 9809141 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536497 | LOC106574921 | coding | upstream | 43732 | 9725375 ~ 9764307 (+) |
| LOC110536529 | LOC106573824 | coding | upstream | 116032 | 9688881 ~ 9692007 (+) |
| LOC118945352 | NA | coding | upstream | 185087 | 9612894 ~ 9622952 (+) |
| LOC110520820 | LOC107573682 | coding | upstream | 299776 | 9490333 ~ 9508263 (+) |
| LOC118944441 | NA | coding | upstream | 321914 | 9485600 ~ 9486125 (+) |
| LOC110520822 | LOC106605747 | coding | downstream | 77730 | 9886871 ~ 9888193 (+) |
| LOC110508611 | rpl18 | coding | downstream | 84120 | 9893261 ~ 9900476 (+) |
| sphk2 | LOC106605743 | coding | downstream | 91668 | 9900809 ~ 9916529 (+) |
| LOC110508641 | LOC106577286 | coding | downstream | 117142 | 9926283 ~ 9933661 (+) |
| LOC110508650 | LOC106577252 | coding | downstream | 164817 | 9973761 ~ 9998774 (+) |
| G222741 | NA | non-coding | upstream | 139 | 9806566 ~ 9807900 (+) |
| G222723 | NA | non-coding | upstream | 40230 | 9765921 ~ 9767809 (+) |
| G222388 | NA | non-coding | upstream | 105465 | 9702008 ~ 9702574 (+) |
| G222354 | NA | non-coding | upstream | 124911 | 9681972 ~ 9683128 (+) |
| G222746 | NA | non-coding | downstream | 13577 | 9822718 ~ 9824032 (+) |
| G222752 | NA | non-coding | downstream | 35080 | 9844221 ~ 9846407 (+) |
| G222753 | NA | non-coding | downstream | 35451 | 9844592 ~ 9849308 (+) |
| G222758 | NA | non-coding | downstream | 51082 | 9860223 ~ 9860491 (+) |
| G222733 | NA | non-coding | downstream | 116604 | 9925745 ~ 9926085 (+) |
| G222353 | LOC106573525 | other | upstream | 126287 | 9679760 ~ 9681752 (+) |
| G222345 | LOC106594812 | other | upstream | 196900 | 9606305 ~ 9611139 (+) |
| G222287 | NA | other | upstream | 362335 | 9445047 ~ 9445704 (+) |
| G222102 | NA | other | upstream | 739888 | 9067146 ~ 9068151 (+) |
| LOC110508845 | LOC106605771 | other | downstream | 464984 | 10267749 ~ 10276176 (+) |
| LOC110508886 | LOC106605776 | other | downstream | 502541 | 10306848 ~ 10314535 (+) |
| LOC110520833 | LOC106575226 | other | downstream | 907510 | 10716613 ~ 10767669 (+) |
| cacng8b | LOC106576929 | other | downstream | 960532 | 10769638 ~ 10827279 (+) |
