G222753


Basic Information

Item Value
gene id G222753
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9844592 ~ 9849308 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254429
ggtgtagttcgtagtgtctggtagacccctggtgtgttgtgttgtgtgtgagtggtgtagttcgtagtgtctggtagacccctggtgagtgtgttgtggtgtgtgtgagtggtgtagttcgtagtgtctggtagacccctggtgtgtgtgttgtggtgtgtgtgttgtggtgtgttgtgttgtgtgtgagtggtgtagttcgtagtgtctggtagacccctggtgcgtgtgttgtggtgtgtgtgagtggtgtagttcgtagtgtctggtagacccctggtgtgtgtgttgtggtgtgtgtgttgtgttgtggtgtgagtgagtggtgtagttcgtagtgcctggtagacccctggtgtgtgtgtgtgtgttgtgttgtggtgtgagtgagtggtgtagttcgtagtgcctggtagacccctggtgtgtgtgttgtggtgtgtgagtggtgtgttgtggtgtggtgtgtgtgagtggtgtagttcgtagtgtctggtagacccatggtgtgtgtgtgttgtgttgtgttgtggtgtgttgtgttgtggtgtgagtggtgtagttcgtagtgcctggtagacccctggtgtgtgtgttgtggtgtgtgtgagtggtgtagttcgtagtgtctggtagacccctggtgtgtgtgttgtggtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254429 True 667 lncRNA 0.52 2 9844592 9849308

Neighbor

gene id symbol gene type direction distance location
LOC110536497 LOC106574921 coding upstream 80285 9725375 ~ 9764307 (+)
LOC110536529 LOC106573824 coding upstream 152585 9688881 ~ 9692007 (+)
LOC118945352 NA coding upstream 221640 9612894 ~ 9622952 (+)
LOC110520820 LOC107573682 coding upstream 336329 9490333 ~ 9508263 (+)
LOC118944441 NA coding upstream 358467 9485600 ~ 9486125 (+)
LOC110520822 LOC106605747 coding downstream 37563 9886871 ~ 9888193 (+)
LOC110508611 rpl18 coding downstream 43953 9893261 ~ 9900476 (+)
sphk2 LOC106605743 coding downstream 51501 9900809 ~ 9916529 (+)
LOC110508641 LOC106577286 coding downstream 76975 9926283 ~ 9933661 (+)
LOC110508650 LOC106577252 coding downstream 124650 9973761 ~ 9998774 (+)
G222746 NA non-coding upstream 20560 9822718 ~ 9824032 (+)
G222743 NA non-coding upstream 35451 9808039 ~ 9809141 (+)
G222741 NA non-coding upstream 36692 9806566 ~ 9807900 (+)
G222723 NA non-coding upstream 76783 9765921 ~ 9767809 (+)
G222388 NA non-coding upstream 142018 9702008 ~ 9702574 (+)
G222758 NA non-coding downstream 10915 9860223 ~ 9860491 (+)
G222733 NA non-coding downstream 76437 9925745 ~ 9926085 (+)
G222770 NA non-coding downstream 87888 9937196 ~ 9937546 (+)
G222797 NA non-coding downstream 115346 9964654 ~ 9965260 (+)
G222799 NA non-coding downstream 118170 9967478 ~ 9967770 (+)
G222353 LOC106573525 other upstream 162840 9679760 ~ 9681752 (+)
G222345 LOC106594812 other upstream 233453 9606305 ~ 9611139 (+)
G222287 NA other upstream 398888 9445047 ~ 9445704 (+)
G222102 NA other upstream 776441 9067146 ~ 9068151 (+)
LOC110508845 LOC106605771 other downstream 424817 10267749 ~ 10276176 (+)
LOC110508886 LOC106605776 other downstream 462374 10306848 ~ 10314535 (+)
LOC110520833 LOC106575226 other downstream 867343 10716613 ~ 10767669 (+)
cacng8b LOC106576929 other downstream 920365 10769638 ~ 10827279 (+)

Expression


Co-expression Network