G222758


Basic Information

Item Value
gene id G222758
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9860223 ~ 9860491 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254434
gtgaaatgcttacaagccctaaaccaacaatgcagttttaagaaaaataagagttaagaaaaatattttgtaaataaactaaagtaacaaataaaagaacaacaataaaataacaatagtgtggctatatacagggggtaccggtaccgagttaatctgcaggggtacaggttagtcgaggtaattgaggtaatatgtacatgtaggtagaggtaaagtgacgatgcatagattataaacagagagtagcagcagcgtaaaaaaggggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU254434 True 269 lncRNA 0.35 1 9860223 9860491

Neighbor

gene id symbol gene type direction distance location
LOC110536497 LOC106574921 coding upstream 95916 9725375 ~ 9764307 (+)
LOC110536529 LOC106573824 coding upstream 168216 9688881 ~ 9692007 (+)
LOC118945352 NA coding upstream 237271 9612894 ~ 9622952 (+)
LOC110520820 LOC107573682 coding upstream 351960 9490333 ~ 9508263 (+)
LOC118944441 NA coding upstream 374098 9485600 ~ 9486125 (+)
LOC110520822 LOC106605747 coding downstream 26380 9886871 ~ 9888193 (+)
LOC110508611 rpl18 coding downstream 32770 9893261 ~ 9900476 (+)
sphk2 LOC106605743 coding downstream 40318 9900809 ~ 9916529 (+)
LOC110508641 LOC106577286 coding downstream 65792 9926283 ~ 9933661 (+)
LOC110508650 LOC106577252 coding downstream 113467 9973761 ~ 9998774 (+)
G222753 NA non-coding upstream 10915 9844592 ~ 9849308 (+)
G222752 NA non-coding upstream 13816 9844221 ~ 9846407 (+)
G222746 NA non-coding upstream 36191 9822718 ~ 9824032 (+)
G222743 NA non-coding upstream 51082 9808039 ~ 9809141 (+)
G222741 NA non-coding upstream 52323 9806566 ~ 9807900 (+)
G222733 NA non-coding downstream 65254 9925745 ~ 9926085 (+)
G222770 NA non-coding downstream 76705 9937196 ~ 9937546 (+)
G222797 NA non-coding downstream 104163 9964654 ~ 9965260 (+)
G222799 NA non-coding downstream 106987 9967478 ~ 9967770 (+)
G222353 LOC106573525 other upstream 178471 9679760 ~ 9681752 (+)
G222345 LOC106594812 other upstream 249084 9606305 ~ 9611139 (+)
G222287 NA other upstream 414519 9445047 ~ 9445704 (+)
G222102 NA other upstream 792072 9067146 ~ 9068151 (+)
LOC110508845 LOC106605771 other downstream 413634 10267749 ~ 10276176 (+)
LOC110508886 LOC106605776 other downstream 451191 10306848 ~ 10314535 (+)
LOC110520833 LOC106575226 other downstream 856160 10716613 ~ 10767669 (+)
cacng8b LOC106576929 other downstream 909182 10769638 ~ 10827279 (+)

Expression


Co-expression Network