G222733


Basic Information

Item Value
gene id G222733
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9925745 ~ 9926085 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254401
aatcacagtaaggtacttaatatactaatctcatatgtatatactgtattctattctactatattttagtcaatgccactccgacattgctcgatcAAATATGTATTTCTTAATTTCATTATTTTACTTtaagatgtgtgtattgttgtgaattgttagatacaactgcactgttggagctagggacacaagcatttcgctacacccgcaataaaatCTGCtacaaatgtgtatgtgaccaataaaattggattttacTTAAATTATTACCCaggaatgatttgatattgagattttttaaaacggctgcattgaacctttaataaaaaaaaataaaaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254401 True 341 lncRNA 0.30 1 9925745 9926085

Neighbor

gene id symbol gene type direction distance location
sphk2 LOC106605743 coding upstream 9216 9900809 ~ 9916529 (+)
LOC110508611 rpl18 coding upstream 25269 9893261 ~ 9900476 (+)
LOC110520822 LOC106605747 coding upstream 37552 9886871 ~ 9888193 (+)
LOC110508601 LOC105018956 coding upstream 43454 9768800 ~ 9882291 (+)
LOC110536497 LOC106574921 coding upstream 161438 9725375 ~ 9764307 (+)
LOC110508641 LOC106577286 coding downstream 198 9926283 ~ 9933661 (+)
LOC110508650 LOC106577252 coding downstream 47873 9973761 ~ 9998774 (+)
LOC110508688 tfpt coding downstream 76801 10002886 ~ 10005885 (+)
cnot3a NA coding downstream 79792 10005877 ~ 10018441 (+)
LOC110508764 LOC106577172 coding downstream 151960 10078045 ~ 10094991 (+)
G222758 NA non-coding upstream 65254 9860223 ~ 9860491 (+)
G222753 NA non-coding upstream 76437 9844592 ~ 9849308 (+)
G222752 NA non-coding upstream 79338 9844221 ~ 9846407 (+)
G222746 NA non-coding upstream 101713 9822718 ~ 9824032 (+)
G222743 NA non-coding upstream 116604 9808039 ~ 9809141 (+)
G222770 NA non-coding downstream 11111 9937196 ~ 9937546 (+)
G222797 NA non-coding downstream 38569 9964654 ~ 9965260 (+)
G222799 NA non-coding downstream 41393 9967478 ~ 9967770 (+)
G222813 NA non-coding downstream 97430 10023515 ~ 10024115 (+)
G222353 LOC106573525 other upstream 243993 9679760 ~ 9681752 (+)
G222345 LOC106594812 other upstream 314606 9606305 ~ 9611139 (+)
LOC110520820 LOC107573682 other upstream 418959 9490333 ~ 9508263 (+)
G222287 NA other upstream 480041 9445047 ~ 9445704 (+)
LOC110508845 LOC106605771 other downstream 348040 10267749 ~ 10276176 (+)
LOC110508886 LOC106605776 other downstream 385597 10306848 ~ 10314535 (+)
LOC110520833 LOC106575226 other downstream 790566 10716613 ~ 10767669 (+)
cacng8b LOC106576929 other downstream 843588 10769638 ~ 10827279 (+)
G223418 u2af2 other downstream 927617 10853702 ~ 10856200 (+)

Expression


Co-expression Network