G222797


Basic Information

Item Value
gene id G222797
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 9964654 ~ 9965260 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254480
ttccgaggatgtgaggacgacggtccgatgtcagaatggttcagataataactacagaacgaagccaacatcagcgtgagctttggttgcgaatggtatgaactttgaactcttattcactacagaagtgatacctcctagccgttgagttagcaacagcagctgcaaacgcaggttaggaaggaacagacagagtatcccgtctaccacacaacgacgttactacaacgtattcaatttaccagcagagacattcttcaaaggacgaaggactcggttgggcaacacggccttccatctaccaccaacctactgaagcgcagctcagagtaaatatttattgcatttcccttttccaaatgggcagtaatttagaatgcatcagatactgtatttacgatagcacagcttctccctgtgttcctcagtcttcccgctctttcactcaaacgcagccccttttcttttgtgtaacaagctgtcatatctgttccgcccgctagggacattttcctttatgacgtaatttgtaatcaagttatgattgaattatgtgtatgtgtaattctgtgtgattagttaggtatttagcaaataaataattaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254480 True 607 lncRNA 0.42 1 9964654 9965260

Neighbor

gene id symbol gene type direction distance location
LOC110508641 LOC106577286 coding upstream 30993 9926283 ~ 9933661 (+)
sphk2 LOC106605743 coding upstream 48125 9900809 ~ 9916529 (+)
LOC110508611 rpl18 coding upstream 64178 9893261 ~ 9900476 (+)
LOC110520822 LOC106605747 coding upstream 76461 9886871 ~ 9888193 (+)
LOC110508601 LOC105018956 coding upstream 82363 9768800 ~ 9882291 (+)
LOC110508650 LOC106577252 coding downstream 8698 9973761 ~ 9998774 (+)
LOC110508688 tfpt coding downstream 37626 10002886 ~ 10005885 (+)
cnot3a NA coding downstream 40617 10005877 ~ 10018441 (+)
LOC110508764 LOC106577172 coding downstream 112785 10078045 ~ 10094991 (+)
LOC110508782 LOC106605762 coding downstream 170631 10135891 ~ 10140365 (+)
G222770 NA non-coding upstream 27108 9937196 ~ 9937546 (+)
G222733 NA non-coding upstream 38569 9925745 ~ 9926085 (+)
G222758 NA non-coding upstream 104163 9860223 ~ 9860491 (+)
G222753 NA non-coding upstream 115346 9844592 ~ 9849308 (+)
G222752 NA non-coding upstream 118247 9844221 ~ 9846407 (+)
G222799 NA non-coding downstream 2218 9967478 ~ 9967770 (+)
G222813 NA non-coding downstream 58255 10023515 ~ 10024115 (+)
G222815 NA non-coding downstream 59209 10024469 ~ 10024854 (+)
G222838 NA non-coding downstream 108282 10073542 ~ 10073772 (+)
G222353 LOC106573525 other upstream 282902 9679760 ~ 9681752 (+)
G222345 LOC106594812 other upstream 353515 9606305 ~ 9611139 (+)
LOC110520820 LOC107573682 other upstream 457868 9490333 ~ 9508263 (+)
G222287 NA other upstream 518950 9445047 ~ 9445704 (+)
LOC110508845 LOC106605771 other downstream 308865 10267749 ~ 10276176 (+)
LOC110508886 LOC106605776 other downstream 346422 10306848 ~ 10314535 (+)
LOC110520833 LOC106575226 other downstream 751391 10716613 ~ 10767669 (+)
cacng8b LOC106576929 other downstream 804413 10769638 ~ 10827279 (+)
G223418 u2af2 other downstream 888442 10853702 ~ 10856200 (+)

Expression


Co-expression Network