G222813


Basic Information

Item Value
gene id G222813
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10023515 ~ 10024115 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254497
ggtctaagacactgcaactcagtgctagaggcgtcactacagaccctggttcgattccaggctgtatcacaactagccgtgattgggagtcccataaggtggcgcacaattggcccagcgtcgtccgggttaggccgtcattgtaaattataatttgttcttaactgacttgcctagttaaataaaggttgaatccCCCAAAAATAAAAGCTGGCCTCGTTGGATAACCGTGGCTATAACagcagttagctagctatgtctAGCTAGTTAAATAACAGGGAAACGTTCGCAAGTTAGCTGAAATTATACGGCACAAACTTATGAGAACTTACCTTCGGAGTTCCAAACTCCTACCGTCAAAAGAAACCCTACAAATCCAACAACTTTCGAAATGTGTTAGACGTTAAAAATGTTTGCTTATGCTATCAACGTCGCCTCTATAGGGAGTCGCAGACGAAAGGCATCACCATAAATAATCCAATGGGTGGTCAGATGTTTGTAACGTTGAGCCTTGAGTAAGGCTTTATGGGAACTGCTGTTTTTATCCGTAGTATATGCCAGTATCAGACCTGGATAAACGTGAATGGTCTTTATCTCACTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254497 True 601 lncRNA 0.43 1 10023515 10024115
Loading

Neighbor

gene id symbol gene type direction distance location
cnot3a NA coding upstream 5074 10005877 ~ 10018441 (+)
LOC110508688 tfpt coding upstream 17630 10002886 ~ 10005885 (+)
LOC110508650 LOC106577252 coding upstream 30088 9973761 ~ 9998774 (+)
LOC110508641 LOC106577286 coding upstream 89854 9926283 ~ 9933661 (+)
sphk2 LOC106605743 coding upstream 106986 9900809 ~ 9916529 (+)
LOC110508764 LOC106577172 coding downstream 53930 10078045 ~ 10094991 (+)
LOC110508782 LOC106605762 coding downstream 111776 10135891 ~ 10140365 (+)
LOC110508830 LOC106592928 coding downstream 156323 10180438 ~ 10226836 (+)
LOC110508838 ube2s coding downstream 209037 10233152 ~ 10239964 (+)
LOC110508861 NA coding downstream 221213 10245328 ~ 10266902 (+)
G222799 NA non-coding upstream 55745 9967478 ~ 9967770 (+)
G222797 NA non-coding upstream 58255 9964654 ~ 9965260 (+)
G222770 NA non-coding upstream 85969 9937196 ~ 9937546 (+)
G222733 NA non-coding upstream 97430 9925745 ~ 9926085 (+)
G222815 NA non-coding downstream 354 10024469 ~ 10024854 (+)
G222838 NA non-coding downstream 49427 10073542 ~ 10073772 (+)
G222839 NA non-coding downstream 49755 10073870 ~ 10074374 (+)
G222805 rps9 non-coding downstream 50610 10074725 ~ 10075966 (+)
G222782 NA non-coding downstream 72068 10096183 ~ 10099336 (+)
G222353 LOC106573525 other upstream 341763 9679760 ~ 9681752 (+)
G222345 LOC106594812 other upstream 412376 9606305 ~ 9611139 (+)
LOC110520820 LOC107573682 other upstream 516729 9490333 ~ 9508263 (+)
G222287 NA other upstream 577811 9445047 ~ 9445704 (+)
LOC110508845 LOC106605771 other downstream 250010 10267749 ~ 10276176 (+)
LOC110508886 LOC106605776 other downstream 287567 10306848 ~ 10314535 (+)
LOC110520833 LOC106575226 other downstream 692536 10716613 ~ 10767669 (+)
cacng8b LOC106576929 other downstream 745558 10769638 ~ 10827279 (+)
G223418 u2af2 other downstream 829587 10853702 ~ 10856200 (+)

Expression

G222813 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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G222813 Expression in each Bioproject

Bar chart with 20 bars.
G222813 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
End of interactive chart.

Co-expression Network