Gene
RNA
| Item | Value |
|---|---|
| gene id | G222805 |
| gene name | rps9 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 10074725 ~ 10075966 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| rps9 | Predicted to enable rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in positive regulation of translational fidelity. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit. Orthologous to human RPS9 (ribosomal protein S9). |
| description |
|---|
| PREDICTED: 40S ribosomal protein S9 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU254489 | True | 488 | lncRNA | 0.55 | 2 | 10074725 | 10075966 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cnot3a | NA | coding | upstream | 56284 | 10005877 ~ 10018441 (+) |
| LOC110508688 | tfpt | coding | upstream | 68840 | 10002886 ~ 10005885 (+) |
| LOC110508650 | LOC106577252 | coding | upstream | 81298 | 9973761 ~ 9998774 (+) |
| LOC110508641 | LOC106577286 | coding | upstream | 141064 | 9926283 ~ 9933661 (+) |
| sphk2 | LOC106605743 | coding | upstream | 158196 | 9900809 ~ 9916529 (+) |
| LOC110508764 | LOC106577172 | coding | downstream | 2079 | 10078045 ~ 10094991 (+) |
| LOC110508782 | LOC106605762 | coding | downstream | 59925 | 10135891 ~ 10140365 (+) |
| LOC110508830 | LOC106592928 | coding | downstream | 104472 | 10180438 ~ 10226836 (+) |
| LOC110508838 | ube2s | coding | downstream | 157186 | 10233152 ~ 10239964 (+) |
| LOC110508861 | NA | coding | downstream | 169362 | 10245328 ~ 10266902 (+) |
| G222839 | NA | non-coding | upstream | 351 | 10073870 ~ 10074374 (+) |
| G222838 | NA | non-coding | upstream | 953 | 10073542 ~ 10073772 (+) |
| G222815 | NA | non-coding | upstream | 49871 | 10024469 ~ 10024854 (+) |
| G222813 | NA | non-coding | upstream | 50610 | 10023515 ~ 10024115 (+) |
| G222782 | NA | non-coding | downstream | 20217 | 10096183 ~ 10099336 (+) |
| G222778 | NA | non-coding | downstream | 23490 | 10099456 ~ 10105221 (+) |
| G222783 | NA | non-coding | downstream | 39962 | 10115928 ~ 10116381 (+) |
| G222855 | NA | non-coding | downstream | 48108 | 10124074 ~ 10124311 (+) |
| G222858 | NA | non-coding | downstream | 53062 | 10129028 ~ 10129243 (+) |
| G222353 | LOC106573525 | other | upstream | 392973 | 9679760 ~ 9681752 (+) |
| G222345 | LOC106594812 | other | upstream | 463586 | 9606305 ~ 9611139 (+) |
| LOC110520820 | LOC107573682 | other | upstream | 567939 | 9490333 ~ 9508263 (+) |
| G222287 | NA | other | upstream | 629021 | 9445047 ~ 9445704 (+) |
| LOC110508845 | LOC106605771 | other | downstream | 198159 | 10267749 ~ 10276176 (+) |
| LOC110508886 | LOC106605776 | other | downstream | 235716 | 10306848 ~ 10314535 (+) |
| LOC110520833 | LOC106575226 | other | downstream | 640685 | 10716613 ~ 10767669 (+) |
| cacng8b | LOC106576929 | other | downstream | 693707 | 10769638 ~ 10827279 (+) |
| G223418 | u2af2 | other | downstream | 777736 | 10853702 ~ 10856200 (+) |
