Item | Value |
---|---|
gene id | G222778 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 10099456 ~ 10105221 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU254459 | False | 5766 | lncRNA | 0.41 | 1 | 10099456 | 10105221 |
TU254460 | True | 5562 | lncRNA | 0.40 | 1 | 10099456 | 10105017 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110508764 | LOC106577172 | coding | upstream | 4465 | 10078045 ~ 10094991 (+) |
cnot3a | NA | coding | upstream | 81015 | 10005877 ~ 10018441 (+) |
LOC110508688 | tfpt | coding | upstream | 93571 | 10002886 ~ 10005885 (+) |
LOC110508650 | LOC106577252 | coding | upstream | 106029 | 9973761 ~ 9998774 (+) |
LOC110508641 | LOC106577286 | coding | upstream | 165795 | 9926283 ~ 9933661 (+) |
LOC110508782 | LOC106605762 | coding | downstream | 30670 | 10135891 ~ 10140365 (+) |
LOC110508830 | LOC106592928 | coding | downstream | 75217 | 10180438 ~ 10226836 (+) |
LOC110508838 | ube2s | coding | downstream | 127931 | 10233152 ~ 10239964 (+) |
LOC110508861 | NA | coding | downstream | 140107 | 10245328 ~ 10266902 (+) |
LOC110508845 | LOC106605771 | coding | downstream | 162528 | 10267749 ~ 10276176 (+) |
G222782 | NA | non-coding | upstream | 120 | 10096183 ~ 10099336 (+) |
G222805 | rps9 | non-coding | upstream | 23490 | 10074725 ~ 10075966 (+) |
G222839 | NA | non-coding | upstream | 25082 | 10073870 ~ 10074374 (+) |
G222838 | NA | non-coding | upstream | 25684 | 10073542 ~ 10073772 (+) |
G222815 | NA | non-coding | upstream | 74602 | 10024469 ~ 10024854 (+) |
G222783 | NA | non-coding | downstream | 10707 | 10115928 ~ 10116381 (+) |
G222855 | NA | non-coding | downstream | 18853 | 10124074 ~ 10124311 (+) |
G222858 | NA | non-coding | downstream | 23807 | 10129028 ~ 10129243 (+) |
G222875 | grwd1 | non-coding | downstream | 43828 | 10149049 ~ 10150148 (+) |
G222879 | NA | non-coding | downstream | 47997 | 10153218 ~ 10153695 (+) |
sphk2 | LOC106605743 | other | upstream | 186358 | 9900809 ~ 9916529 (+) |
G222353 | LOC106573525 | other | upstream | 417704 | 9679760 ~ 9681752 (+) |
G222345 | LOC106594812 | other | upstream | 488317 | 9606305 ~ 9611139 (+) |
LOC110520820 | LOC107573682 | other | upstream | 592670 | 9490333 ~ 9508263 (+) |
G222287 | NA | other | upstream | 653752 | 9445047 ~ 9445704 (+) |
LOC110508886 | LOC106605776 | other | downstream | 206461 | 10306848 ~ 10314535 (+) |
LOC110520833 | LOC106575226 | other | downstream | 611430 | 10716613 ~ 10767669 (+) |
cacng8b | LOC106576929 | other | downstream | 664452 | 10769638 ~ 10827279 (+) |
G223418 | u2af2 | other | downstream | 748481 | 10853702 ~ 10856200 (+) |