G222855


Basic Information

Item Value
gene id G222855
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10124074 ~ 10124311 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254542
gtttcaggctgggtttctgtacagcactttgagatatcagctgatgtacgaagggctatataaatacatttgatttgatcctaaccaacttgccctctaaatacacctctgctgtcttcaaccaagatctcagcaatcactgcctcattgcctgcatccgtaatgggtcagcggtcaaacgacctctaCTCATCACTggcaaacgctccctgaaacacttcagcgagcaagcATTTCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254542 True 238 lncRNA 0.46 1 10124074 10124311

Neighbor

gene id symbol gene type direction distance location
LOC110508764 LOC106577172 coding upstream 29083 10078045 ~ 10094991 (+)
cnot3a NA coding upstream 105633 10005877 ~ 10018441 (+)
LOC110508688 tfpt coding upstream 118189 10002886 ~ 10005885 (+)
LOC110508650 LOC106577252 coding upstream 130647 9973761 ~ 9998774 (+)
LOC110508641 LOC106577286 coding upstream 190413 9926283 ~ 9933661 (+)
LOC110508782 LOC106605762 coding downstream 11580 10135891 ~ 10140365 (+)
LOC110508830 LOC106592928 coding downstream 56127 10180438 ~ 10226836 (+)
LOC110508838 ube2s coding downstream 108841 10233152 ~ 10239964 (+)
LOC110508861 NA coding downstream 121017 10245328 ~ 10266902 (+)
LOC110508845 LOC106605771 coding downstream 143438 10267749 ~ 10276176 (+)
G222783 NA non-coding upstream 7693 10115928 ~ 10116381 (+)
G222778 NA non-coding upstream 18853 10099456 ~ 10105221 (+)
G222782 NA non-coding upstream 24738 10096183 ~ 10099336 (+)
G222805 rps9 non-coding upstream 48108 10074725 ~ 10075966 (+)
G222839 NA non-coding upstream 49700 10073870 ~ 10074374 (+)
G222858 NA non-coding downstream 4717 10129028 ~ 10129243 (+)
G222875 grwd1 non-coding downstream 24738 10149049 ~ 10150148 (+)
G222879 NA non-coding downstream 28907 10153218 ~ 10153695 (+)
G222910 NA non-coding downstream 165110 10289421 ~ 10289629 (+)
sphk2 LOC106605743 other upstream 210976 9900809 ~ 9916529 (+)
G222353 LOC106573525 other upstream 442322 9679760 ~ 9681752 (+)
G222345 LOC106594812 other upstream 512935 9606305 ~ 9611139 (+)
LOC110520820 LOC107573682 other upstream 617288 9490333 ~ 9508263 (+)
G222287 NA other upstream 678370 9445047 ~ 9445704 (+)
LOC110508886 LOC106605776 other downstream 187371 10306848 ~ 10314535 (+)
LOC110520833 LOC106575226 other downstream 592340 10716613 ~ 10767669 (+)
cacng8b LOC106576929 other downstream 645362 10769638 ~ 10827279 (+)
G223418 u2af2 other downstream 729391 10853702 ~ 10856200 (+)

Expression


Co-expression Network