G223112


Basic Information

Item Value
gene id G223112
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10143309 ~ 10143823 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254852
TCCTGCTGGAAAAACCAATCCTTGCATCAACGATCCTCCACCTAATTTCACAGTGGGTACGAGACACTGGCTtgtaggcctctccaggtctCGCACCCGCTGTGATATTTGGTGGAGGATCAGCGATGATCTGGGGGTGCTTCAGCAAGGCTTGAATCGggcagatttgtctttgtgaaggacacatgaatcaagccacgtacaaggttgtcctggaagaaaacttgcttccttctgctctgacaatgttccccaactctgaggattggtttttccagcaggacaatgctccatgccacacagccaggtcaatcaaggtgtggatggaggaccaatttgggagaaatgttgtcagtttatagaataaaacaaaaatgttaattTTACCCAAAAACATAGCTATAAATCGTGAAACTGAtaattttgcagtggtctcttaattttttccagagctgtaATATGCACACAGTGGTCTTCTCTAAATACCCATACCAGCGTACTACATACTTAAACTC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254852 True 515 lncRNA 0.44 1 10143309 10143823

Neighbor

gene id symbol gene type direction distance location
LOC110520825 LOC106605761 coding downstream 14407 10099437 ~ 10128902 (-)
rps9 rps9 coding downstream 65917 10074725 ~ 10077392 (-)
mboat7 mboat7 coding downstream 70454 10063117 ~ 10072855 (-)
tmc4 LOC106577196 coding downstream 80839 10053535 ~ 10062470 (-)
LOC110508742 LOC106577219 coding downstream 89941 10047635 ~ 10053368 (-)
LOC110508790 grwd1 coding upstream 710 10144533 ~ 10151145 (-)
LOC110508798 LOC106577146 coding upstream 16511 10160334 ~ 10163967 (-)
flcn LOC106577129 coding upstream 23961 10167784 ~ 10180249 (-)
LOC118945753 NA coding upstream 47534 10191357 ~ 10191771 (-)
LOC110508823 josd2 coding upstream 83073 10226896 ~ 10229409 (-)
G223081 NA non-coding downstream 53947 10086852 ~ 10089362 (-)
LOC110520824 lmtk3 non-coding downstream 118453 10024448 ~ 10047484 (-)
LOC110508696 ndufa3 non-coding downstream 140415 10001415 ~ 10002941 (-)
G223058 NA non-coding downstream 143933 9998968 ~ 9999376 (-)
G223115 NA non-coding upstream 9522 10153345 ~ 10153706 (-)
G223148 NA non-coding upstream 73638 10217461 ~ 10219349 (-)
G223108 NA non-coding upstream 81780 10225603 ~ 10260865 (-)
G223163 NA non-coding upstream 119437 10263260 ~ 10266898 (-)
G223169 NA non-coding upstream 154638 10298461 ~ 10298666 (-)
LOC110508724 prpf31 other downstream 120106 10019313 ~ 10024005 (-)
G223070 NA other downstream 128417 10012961 ~ 10014892 (-)
LOC110534283 LOC106573819 other downstream 459938 9679758 ~ 9689081 (-)
LOC118944443 LOC106573533 other downstream 469870 9665862 ~ 9673439 (-)
znf628 LOC106605829 other upstream 927123 11068525 ~ 11079570 (-)
G223942 LOC106576860 other upstream 1028297 11172120 ~ 11174367 (-)
G223969 LOC106605840 other upstream 1132094 11275917 ~ 11278628 (-)
LOC110509576 LOC106576947 other upstream 1583539 11727284 ~ 11741584 (-)
G224869 NA other upstream 1609028 11752851 ~ 11753680 (-)

Expression


Co-expression Network