Gene
RNA
| Item | Value |
|---|---|
| gene id | G222916 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 10299148 ~ 10299461 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU254616 | True | 314 | lncRNA | 0.37 | 1 | 10299148 | 10299461 |
10,296,400
10,296,800
10,297,200
10,297,600
10,298,000
10,298,400
10,298,400
10,298,800
10,299,200
10,299,600
10,300,000
10,300,400
10,300,800
NC_048567.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508875 | LOC106605773 | coding | upstream | 12059 | 10278141 ~ 10287089 (+) |
| LOC110508845 | LOC106605771 | coding | upstream | 22972 | 10267749 ~ 10276176 (+) |
| LOC110508861 | NA | coding | upstream | 32246 | 10245328 ~ 10266902 (+) |
| LOC110508838 | ube2s | coding | upstream | 59184 | 10233152 ~ 10239964 (+) |
| LOC110508830 | LOC106592928 | coding | upstream | 72312 | 10180438 ~ 10226836 (+) |
| LOC110508886 | LOC106605776 | coding | downstream | 7387 | 10306848 ~ 10314535 (+) |
| LOC110508924 | LOC106605777 | coding | downstream | 41468 | 10340929 ~ 10363673 (+) |
| LOC110520829 | LOC102782376 | coding | downstream | 132297 | 10431758 ~ 10605056 (+) |
| prkcg | LOC105019084 | coding | downstream | 361629 | 10661090 ~ 10701728 (+) |
| LOC110520833 | LOC106575226 | coding | downstream | 417152 | 10716613 ~ 10767669 (+) |
| G222911 | NA | non-coding | upstream | 8302 | 10290552 ~ 10290846 (+) |
| G222910 | NA | non-coding | upstream | 9519 | 10289421 ~ 10289629 (+) |
| G222879 | NA | non-coding | upstream | 145453 | 10153218 ~ 10153695 (+) |
| G222875 | grwd1 | non-coding | upstream | 149000 | 10149049 ~ 10150148 (+) |
| G222918 | NA | non-coding | downstream | 2743 | 10302204 ~ 10303215 (+) |
| G222919 | NA | non-coding | downstream | 5403 | 10304864 ~ 10305088 (+) |
| G222938 | NA | non-coding | downstream | 36382 | 10335843 ~ 10336320 (+) |
| G222939 | NA | non-coding | downstream | 36922 | 10336383 ~ 10336717 (+) |
| sphk2 | LOC106605743 | other | upstream | 386050 | 9900809 ~ 9916529 (+) |
| G222353 | LOC106573525 | other | upstream | 617396 | 9679760 ~ 9681752 (+) |
| G222345 | LOC106594812 | other | upstream | 688009 | 9606305 ~ 9611139 (+) |
| LOC110520820 | LOC107573682 | other | upstream | 792362 | 9490333 ~ 9508263 (+) |
| cacng8b | LOC106576929 | other | downstream | 470212 | 10769638 ~ 10827279 (+) |
| G223418 | u2af2 | other | downstream | 554241 | 10853702 ~ 10856200 (+) |
| LOC110508993 | LOC106576906 | other | downstream | 577296 | 10876757 ~ 10878635 (+) |
