G222918


Basic Information

Item Value
gene id G222918
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10302204 ~ 10303215 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254621
agacaggaaacacagggataaatacactggcacagagagacaggaaacacagggataaatacactggcacagagagacaggaaacacagggataaatacactggtacagagagacaggaaacacagggataaatacactggcacagagagacaggaaacacagggataaatacactggcacaaagagacaggaaacacagggataaatacactggcacagagagacaggaaacacagggataaatacactggcacagagagacaggaaacacagggataaatacactggcacagagagacaggaaacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254621 True 309 lncRNA 0.38 2 10302204 10303215

Neighbor

gene id symbol gene type direction distance location
LOC110508875 LOC106605773 coding upstream 15115 10278141 ~ 10287089 (+)
LOC110508845 LOC106605771 coding upstream 26028 10267749 ~ 10276176 (+)
LOC110508861 NA coding upstream 35302 10245328 ~ 10266902 (+)
LOC110508838 ube2s coding upstream 62240 10233152 ~ 10239964 (+)
LOC110508830 LOC106592928 coding upstream 75368 10180438 ~ 10226836 (+)
LOC110508886 LOC106605776 coding downstream 3633 10306848 ~ 10314535 (+)
LOC110508924 LOC106605777 coding downstream 37714 10340929 ~ 10363673 (+)
LOC110520829 LOC102782376 coding downstream 128543 10431758 ~ 10605056 (+)
prkcg LOC105019084 coding downstream 357875 10661090 ~ 10701728 (+)
LOC110520833 LOC106575226 coding downstream 413398 10716613 ~ 10767669 (+)
G222916 NA non-coding upstream 2743 10299148 ~ 10299461 (+)
G222911 NA non-coding upstream 11358 10290552 ~ 10290846 (+)
G222910 NA non-coding upstream 12575 10289421 ~ 10289629 (+)
G222879 NA non-coding upstream 148509 10153218 ~ 10153695 (+)
G222919 NA non-coding downstream 1649 10304864 ~ 10305088 (+)
G222938 NA non-coding downstream 32628 10335843 ~ 10336320 (+)
G222939 NA non-coding downstream 33168 10336383 ~ 10336717 (+)
G222940 NA non-coding downstream 34154 10337369 ~ 10337761 (+)
sphk2 LOC106605743 other upstream 389106 9900809 ~ 9916529 (+)
G222353 LOC106573525 other upstream 620452 9679760 ~ 9681752 (+)
G222345 LOC106594812 other upstream 691065 9606305 ~ 9611139 (+)
LOC110520820 LOC107573682 other upstream 795418 9490333 ~ 9508263 (+)
cacng8b LOC106576929 other downstream 466458 10769638 ~ 10827279 (+)
G223418 u2af2 other downstream 550487 10853702 ~ 10856200 (+)
LOC110508993 LOC106576906 other downstream 573542 10876757 ~ 10878635 (+)

Expression


Co-expression Network