G223179



Basic Information


Item Value
gene id G223179
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10314715 ~ 10315054 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU254938
CAAATGTATTGTTATAGCAGGATGTCAAAGTGTCACCTTTTTAGAATGTCCATTAACATTTTCTGCCCTATAGTTGTGGAAACAATGAAAATCGAGGGAATACTTGATGGGAAATGGTTCATGAGATCAGTGATCATTTTCAGACCCTGTAAGGGAATGGAAATAAAATACATTCAAaagaaattaataaataaatataaccaATGTTCTCATTGGAAAGTACCGTTCTGATACTTATCATTCAAAAGTCATTTTCAATCCCTTTCAGTGTCAGAGTTGTCCAAATTGAACACAGTGAAGCTACACCACCtttgctctcctcctcctcctcctcctcctc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU254938 True 340 lncRNA 0.36 1 10314715 10315054

Neighbor


gene id symbol gene type direction distance location
LOC110508823 josd2 coding downstream 85306 10226896 ~ 10229409 (-)
LOC118945753 NA coding downstream 122944 10191357 ~ 10191771 (-)
flcn LOC106577129 coding downstream 134466 10167784 ~ 10180249 (-)
LOC110508798 LOC106577146 coding downstream 150748 10160334 ~ 10163967 (-)
LOC110508790 grwd1 coding downstream 163570 10144533 ~ 10151145 (-)
pitpnc1b LOC106593696 coding upstream 82010 10396551 ~ 10413072 (-)
LOC110508947 LOC106576934 coding upstream 516512 10831566 ~ 10847242 (-)
LOC110508966 u2af2 coding upstream 538648 10853702 ~ 10865262 (-)
LOC110508957 LOC106576897 coding upstream 550481 10865535 ~ 10876129 (-)
LOC110508973 LOC106576890 coding upstream 563655 10878709 ~ 10895912 (-)
G223178 LOC106605776 non-coding downstream 222 10313634 ~ 10314493 (-)
G223175 LOC106605776 non-coding downstream 3222 10311154 ~ 10311493 (-)
G223173 NA non-coding downstream 7089 10307303 ~ 10307626 (-)
G223172 NA non-coding downstream 7755 10306687 ~ 10306960 (-)
G223169 NA non-coding downstream 16049 10298461 ~ 10298666 (-)
G223180 NA non-coding upstream 96 10315150 ~ 10335177 (-)
G223193 NA non-coding upstream 25525 10340579 ~ 10340789 (-)
G223194 NA non-coding upstream 25874 10340928 ~ 10341229 (-)
G223196 NA non-coding upstream 26891 10341945 ~ 10342700 (-)
G223198 NA non-coding upstream 30981 10346035 ~ 10346270 (-)
LOC110508724 prpf31 other downstream 291512 10019313 ~ 10024005 (-)
G223070 NA other downstream 299823 10012961 ~ 10014892 (-)
LOC110508696 ndufa3 other downstream 311821 10001415 ~ 10002941 (-)
LOC110534283 LOC106573819 other downstream 631344 9679758 ~ 9689081 (-)
LOC118944443 LOC106573533 other downstream 641276 9665862 ~ 9673439 (-)
znf628 LOC106605829 other upstream 755892 11068525 ~ 11079570 (-)
G223942 LOC106576860 other upstream 857066 11172120 ~ 11174367 (-)
G223969 LOC106605840 other upstream 960863 11275917 ~ 11278628 (-)
LOC110509576 LOC106576947 other upstream 1412308 11727284 ~ 11741584 (-)
G224869 NA other upstream 1437797 11752851 ~ 11753680 (-)

Expression



Co-expression Network