G222938


Basic Information

Item Value
gene id G222938
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10335843 ~ 10336320 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254645
AAATGAGAAAGAGATGTGAAGGCCTTTCTGTATGCAGAAGCATAACAAGGTCACTACAGTGCACAATTAGGTCtgcaatgtgtgtgtgcacatgcatgtaTTTGTGTATGAGtctgattaaatcaaatcaaatcaaatcaaattttatttgtcacatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacaagtaatctaactaacaattccaaaactactgtcttatacacagtgtaaggggataaagaatatgtacataaggatatgtgaatgagtgatggtacagagcagcataggcaggatacagtagatggtatcgagtacagtatatacatgaggtgagtatgtaaacaaagtggcatagttaaagtggctagtgatacatgtattacataaggatgcagtcgatgatatagagtacagtatatacg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254645 True 478 lncRNA 0.37 1 10335843 10336320

Neighbor

gene id symbol gene type direction distance location
LOC110508886 LOC106605776 coding upstream 21308 10306848 ~ 10314535 (+)
LOC110520828 NA coding upstream 29644 10295464 ~ 10306199 (+)
LOC110508875 LOC106605773 coding upstream 48754 10278141 ~ 10287089 (+)
LOC110508845 LOC106605771 coding upstream 59667 10267749 ~ 10276176 (+)
LOC110508861 NA coding upstream 68941 10245328 ~ 10266902 (+)
LOC110508924 LOC106605777 coding downstream 4609 10340929 ~ 10363673 (+)
LOC110520829 LOC102782376 coding downstream 95438 10431758 ~ 10605056 (+)
prkcg LOC105019084 coding downstream 324770 10661090 ~ 10701728 (+)
LOC110520833 LOC106575226 coding downstream 380293 10716613 ~ 10767669 (+)
cacng8b LOC106576929 coding downstream 433318 10769638 ~ 10827279 (+)
G222919 NA non-coding upstream 30755 10304864 ~ 10305088 (+)
G222918 NA non-coding upstream 32628 10302204 ~ 10303215 (+)
G222916 NA non-coding upstream 36382 10299148 ~ 10299461 (+)
G222911 NA non-coding upstream 44997 10290552 ~ 10290846 (+)
G222939 NA non-coding downstream 63 10336383 ~ 10336717 (+)
G222940 NA non-coding downstream 1049 10337369 ~ 10337761 (+)
G223226 NA non-coding downstream 55717 10392037 ~ 10392260 (+)
G223228 NA non-coding downstream 57059 10393379 ~ 10393580 (+)
G223232 NA non-coding downstream 60049 10396369 ~ 10397146 (+)
sphk2 LOC106605743 other upstream 422745 9900809 ~ 9916529 (+)
G222353 LOC106573525 other upstream 654091 9679760 ~ 9681752 (+)
G222345 LOC106594812 other upstream 724704 9606305 ~ 9611139 (+)
G223418 u2af2 other downstream 517382 10853702 ~ 10856200 (+)
LOC110508993 LOC106576906 other downstream 540437 10876757 ~ 10878635 (+)
G223434 LOC106595748 other downstream 613829 10950149 ~ 10952739 (+)

Expression


Co-expression Network