G223198



Basic Information


Item Value
gene id G223198
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10346035 ~ 10346270 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU254960
GGAAACACCTACCTCTTCACCTGATTCTACAGTAAACAGCTACCTCTTAGCCTGGAAACACCTACCTCTTAGCCTGGTTACTGCACCTCTTAGCCTGGTAACAGCTACCTCTTAGCCTGGTAACTGCACCTCTTAGCCTGGTAACAGCTACCTCTTAGCCTGGTAACAGCTACCTCTTAGCCTGGTAACTGCACCTCTTAGCCTGGTAACACCTACCTCTTAGCCTGGTAACTGCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU254960 True 236 lncRNA 0.50 1 10346035 10346270

Neighbor


gene id symbol gene type direction distance location
LOC110508823 josd2 coding downstream 116626 10226896 ~ 10229409 (-)
LOC118945753 NA coding downstream 154264 10191357 ~ 10191771 (-)
flcn LOC106577129 coding downstream 165786 10167784 ~ 10180249 (-)
LOC110508798 LOC106577146 coding downstream 182068 10160334 ~ 10163967 (-)
LOC110508790 grwd1 coding downstream 194890 10144533 ~ 10151145 (-)
pitpnc1b LOC106593696 coding upstream 50794 10396551 ~ 10413072 (-)
LOC110508947 LOC106576934 coding upstream 485296 10831566 ~ 10847242 (-)
LOC110508966 u2af2 coding upstream 507432 10853702 ~ 10865262 (-)
LOC110508957 LOC106576897 coding upstream 519265 10865535 ~ 10876129 (-)
LOC110508973 LOC106576890 coding upstream 532439 10878709 ~ 10895912 (-)
G223196 NA non-coding downstream 3335 10341945 ~ 10342700 (-)
G223194 NA non-coding downstream 4806 10340928 ~ 10341229 (-)
G223193 NA non-coding downstream 5246 10340579 ~ 10340789 (-)
G223180 NA non-coding downstream 10858 10315150 ~ 10335177 (-)
G223179 NA non-coding downstream 30981 10314715 ~ 10315054 (-)
G223200 NA non-coding upstream 1319 10347589 ~ 10348128 (-)
G223203 NA non-coding upstream 8136 10354406 ~ 10354639 (-)
G223204 NA non-coding upstream 8396 10354666 ~ 10354938 (-)
G223205 LOC106605777 non-coding upstream 9120 10355390 ~ 10356030 (-)
G223207 LOC106577106 non-coding upstream 12483 10358753 ~ 10363290 (-)
LOC110508724 prpf31 other downstream 322832 10019313 ~ 10024005 (-)
G223070 NA other downstream 331143 10012961 ~ 10014892 (-)
LOC110508696 ndufa3 other downstream 343141 10001415 ~ 10002941 (-)
LOC110534283 LOC106573819 other downstream 662664 9679758 ~ 9689081 (-)
LOC118944443 LOC106573533 other downstream 672596 9665862 ~ 9673439 (-)
znf628 LOC106605829 other upstream 724676 11068525 ~ 11079570 (-)
G223942 LOC106576860 other upstream 825850 11172120 ~ 11174367 (-)
G223969 LOC106605840 other upstream 929647 11275917 ~ 11278628 (-)
LOC110509576 LOC106576947 other upstream 1381092 11727284 ~ 11741584 (-)
G224869 NA other upstream 1406581 11752851 ~ 11753680 (-)

Expression



Co-expression Network