G223204



Basic Information


Item Value
gene id G223204
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10354666 ~ 10354938 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU254966
TGAGAAGGCCCAGGGGGAGGGAGGTTTGGTGTATGTAGTGCTACCTACCTGGGTGTGACGGTGAGCTGCTGCTGGTCCTGTTGCTGCTGgttctgctgttgttgttgttgtttctgaaGGATCTGCAGCTGGAGGAACACCTGCTGTTGCTGCAGGAGGCTGGAGTAGGCGGGGTCTAAGAGCTGGGCTGGGGTGGGACTCCTCTGACTGGCCCCTCCCCCTGAGCACAATGTTAATAATTATCGACTTCCCTGCTATTTAGTGGACTCATTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU254966 True 273 lncRNA 0.55 1 10354666 10354938

Neighbor


gene id symbol gene type direction distance location
LOC110508823 josd2 coding downstream 125257 10226896 ~ 10229409 (-)
LOC118945753 NA coding downstream 162895 10191357 ~ 10191771 (-)
flcn LOC106577129 coding downstream 174417 10167784 ~ 10180249 (-)
LOC110508798 LOC106577146 coding downstream 190699 10160334 ~ 10163967 (-)
LOC110508790 grwd1 coding downstream 203521 10144533 ~ 10151145 (-)
pitpnc1b LOC106593696 coding upstream 42126 10396551 ~ 10413072 (-)
LOC110508947 LOC106576934 coding upstream 476628 10831566 ~ 10847242 (-)
LOC110508966 u2af2 coding upstream 498764 10853702 ~ 10865262 (-)
LOC110508957 LOC106576897 coding upstream 510597 10865535 ~ 10876129 (-)
LOC110508973 LOC106576890 coding upstream 523771 10878709 ~ 10895912 (-)
G223203 NA non-coding downstream 27 10354406 ~ 10354639 (-)
G223200 NA non-coding downstream 6538 10347589 ~ 10348128 (-)
G223198 NA non-coding downstream 8396 10346035 ~ 10346270 (-)
G223196 NA non-coding downstream 11966 10341945 ~ 10342700 (-)
G223194 NA non-coding downstream 13437 10340928 ~ 10341229 (-)
G223205 LOC106605777 non-coding upstream 452 10355390 ~ 10356030 (-)
G223207 LOC106577106 non-coding upstream 3815 10358753 ~ 10363290 (-)
G223208 NA non-coding upstream 9502 10364440 ~ 10364644 (-)
G223222 NA non-coding upstream 32164 10387102 ~ 10387372 (-)
G223225 NA non-coding upstream 36534 10391472 ~ 10391701 (-)
LOC110508724 prpf31 other downstream 331463 10019313 ~ 10024005 (-)
G223070 NA other downstream 339774 10012961 ~ 10014892 (-)
LOC110508696 ndufa3 other downstream 351772 10001415 ~ 10002941 (-)
LOC110534283 LOC106573819 other downstream 671295 9679758 ~ 9689081 (-)
LOC118944443 LOC106573533 other downstream 681227 9665862 ~ 9673439 (-)
znf628 LOC106605829 other upstream 716008 11068525 ~ 11079570 (-)
G223942 LOC106576860 other upstream 817182 11172120 ~ 11174367 (-)
G223969 LOC106605840 other upstream 920979 11275917 ~ 11278628 (-)
LOC110509576 LOC106576947 other upstream 1372424 11727284 ~ 11741584 (-)
G224869 NA other upstream 1397913 11752851 ~ 11753680 (-)

Expression



Co-expression Network